Literature DB >> 9261867

Simulation of protein crystal nucleation.

M Pellegrini1, S W Wukovitz, T O Yeates.   

Abstract

To attempt to understand the physical principles underlying protein crystallization, an algorithm is described for simulating the crystal nucleation event computationally. The validity of the approach is supported by its ability to reproduce closely the wellknown preference of proteins for particular space group symmetries. The success of the algorithm supports a recent argument that protein crystallization is limited primarily by the entropic effects of geometric restrictions imposed during nucleation, rather than particular energetic factors. These simulations provide a new tool for attacking the problem of protein crystallization by allowing quantitative evaluation of new ideas such as the use of racemic protein mixtures.

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Year:  1997        PMID: 9261867

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  4 in total

1.  Analysis of solvent content and oligomeric states in protein crystals--does symmetry matter?

Authors:  Maksymilian Chruszcz; Wojciech Potrzebowski; Matthew D Zimmerman; Marek Grabowski; Heping Zheng; Piotr Lasota; Wladek Minor
Journal:  Protein Sci       Date:  2008-04       Impact factor: 6.725

2.  Designing a Bernal spiral from patchy colloids.

Authors:  John W R Morgan; Dwaipayan Chakrabarti; Nicolas Dorsaz; David J Wales
Journal:  ACS Nano       Date:  2013-01-31       Impact factor: 15.881

3.  Mirror image forms of snow flea antifreeze protein prepared by total chemical synthesis have identical antifreeze activities.

Authors:  Brad L Pentelute; Zachary P Gates; Jennifer L Dashnau; Jane M Vanderkooi; Stephen B H Kent
Journal:  J Am Chem Soc       Date:  2008-07-04       Impact factor: 15.419

4.  X-ray structure of snow flea antifreeze protein determined by racemic crystallization of synthetic protein enantiomers.

Authors:  Brad L Pentelute; Zachary P Gates; Valentina Tereshko; Jennifer L Dashnau; Jane M Vanderkooi; Anthony A Kossiakoff; Stephen B H Kent
Journal:  J Am Chem Soc       Date:  2008-07-04       Impact factor: 15.419

  4 in total

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