Literature DB >> 9256423

A protein encoded by a group I intron in Aspergillus nidulans directly assists RNA splicing and is a DNA endonuclease.

Y Ho1, S J Kim, R B Waring.   

Abstract

Some group I introns self-splice in vitro, but almost all are thought to be assisted by proteins in vivo. Mutational analysis has shown that the splicing of certain group I introns depends upon a maturase protein encoded by the intron itself. However the effect of a protein on splicing can be indirect. We now provide evidence that a mitochondrial intron-encoded protein from Aspergillus nidulans directly facilitates splicing in vitro. This demonstrates that a maturase is an RNA splicing protein. The protein-assisted reaction is as fast as that of any other known group I intron. Interestingly the protein is also a DNA endonuclease, an activity required for intron mobilization. Mobile elements frequently encode proteins that promote their propagation. Intron-encoded proteins that also assist RNA splicing would facilitate both the transposition and horizontal transmission of introns.

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Year:  1997        PMID: 9256423      PMCID: PMC22997          DOI: 10.1073/pnas.94.17.8994

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  57 in total

1.  A tyrosyl-tRNA synthetase binds specifically to the group I intron catalytic core.

Authors:  Q Guo; A M Lambowitz
Journal:  Genes Dev       Date:  1992-08       Impact factor: 11.361

Review 2.  Phage T4 introns: self-splicing and mobility.

Authors:  M Belfort
Journal:  Annu Rev Genet       Date:  1990       Impact factor: 16.830

3.  Unusual resistance of peptidyl transferase to protein extraction procedures.

Authors:  H F Noller; V Hoffarth; L Zimniak
Journal:  Science       Date:  1992-06-05       Impact factor: 47.728

4.  Reverse transcriptase activity associated with maturase-encoding group II introns in yeast mitochondria.

Authors:  J C Kennell; J V Moran; P S Perlman; R A Butow; A M Lambowitz
Journal:  Cell       Date:  1993-04-09       Impact factor: 41.582

Review 5.  Group I and group II introns.

Authors:  R Saldanha; G Mohr; M Belfort; A M Lambowitz
Journal:  FASEB J       Date:  1993-01       Impact factor: 5.191

Review 6.  Introns as mobile genetic elements.

Authors:  A M Lambowitz; M Belfort
Journal:  Annu Rev Biochem       Date:  1993       Impact factor: 23.643

7.  Two intron sequences in yeast mitochondrial COX1 gene: homology among URF-containing introns and strain-dependent variation in flanking exons.

Authors:  L A Hensgens; L Bonen; M de Haan; G van der Horst; L A Grivell
Journal:  Cell       Date:  1983-02       Impact factor: 41.582

8.  Functional domains in introns. RNA processing intermediates in cis- and trans-acting mutants in the penultimate intron of the mitochondrial gene for cytochrome b.

Authors:  M R Lamb; P Q Anziano; K R Glaus; D K Hanson; H J Klapper; P S Perlman; H R Mahler
Journal:  J Biol Chem       Date:  1983-02-10       Impact factor: 5.157

9.  The neurospora CYT-18 protein suppresses defects in the phage T4 td intron by stabilizing the catalytically active structure of the intron core.

Authors:  G Mohr; A Zhang; J A Gianelos; M Belfort; A M Lambowitz
Journal:  Cell       Date:  1992-05-01       Impact factor: 41.582

10.  Comparison of fungal mitochondrial introns reveals extensive homologies in RNA secondary structure.

Authors:  F Michel; A Jacquier; B Dujon
Journal:  Biochimie       Date:  1982-10       Impact factor: 4.079

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  28 in total

1.  Purification and characterization of the DNA cleavage and recognition site of I-ScaI mitochondrial group I intron encoded endonuclease produced in Escherichia coli.

Authors:  C Monteilhet; D Dziadkowiec; T Szczepanek; J Lazowska
Journal:  Nucleic Acids Res       Date:  2000-03-01       Impact factor: 16.971

2.  The bI4 group I intron binds directly to both its protein splicing partners, a tRNA synthetase and maturase, to facilitate RNA splicing activity.

Authors:  S B Rho; S A Martinis
Journal:  RNA       Date:  2000-12       Impact factor: 4.942

3.  Recruitment of intron-encoded and co-opted proteins in splicing of the bI3 group I intron RNA.

Authors:  Gurminder S Bassi; Daniela M de Oliveira; Malcolm F White; Kevin M Weeks
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-02       Impact factor: 11.205

Review 4.  Homing endonucleases: structural and functional insight into the catalysts of intron/intein mobility.

Authors:  B S Chevalier; B L Stoddard
Journal:  Nucleic Acids Res       Date:  2001-09-15       Impact factor: 16.971

5.  Unusual evolutionary history of the tRNA splicing endonuclease EndA: relationship to the LAGLIDADG and PD-(D/E)XK deoxyribonucleases.

Authors:  J M Bujnicki; L Rychlewski
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

6.  Structural and biochemical analyses of DNA and RNA binding by a bifunctional homing endonuclease and group I intron splicing factor.

Authors:  Jill M Bolduc; P Clint Spiegel; Piyali Chatterjee; Kristina L Brady; Maureen E Downing; Mark G Caprara; Richard B Waring; Barry L Stoddard
Journal:  Genes Dev       Date:  2003-11-21       Impact factor: 11.361

7.  Intragenic suppressors that restore the activity of the maturase encoded by the second intron of the Saccharomyces cerevisiae cyt b gene.

Authors:  Ewa Maciaszczyk; Stanislaw Ulaszewski; Jaga Lazowska
Journal:  Curr Genet       Date:  2004-05-27       Impact factor: 3.886

8.  A group II intron encodes a functional LAGLIDADG homing endonuclease and self-splices under moderate temperature and ionic conditions.

Authors:  Sahra-Taylor Mullineux; Maria Costa; Gurminder S Bassi; François Michel; Georg Hausner
Journal:  RNA       Date:  2010-07-23       Impact factor: 4.942

9.  An allosteric-feedback mechanism for protein-assisted group I intron splicing.

Authors:  Mark G Caprara; Piyali Chatterjee; Amanda Solem; Kristina L Brady-Passerini; Benjamin J Kaspar
Journal:  RNA       Date:  2006-12-12       Impact factor: 4.942

Review 10.  Genetic conservation versus variability in mitochondria: the architecture of the mitochondrial genome in the petite-negative yeast Schizosaccharomyces pombe.

Authors:  Bernd Schäfer
Journal:  Curr Genet       Date:  2003-05-09       Impact factor: 3.886

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