Literature DB >> 9228614

Recognizing circular decomposable metrics.

M Farach1.   

Abstract

Circular decomposable metrics (CDMs) have been used in phylogenetic studies. The fastest algorithm for recognizing a CDM runs in time O(n5), given an n x n table of pairwise distances. We give an O(n2) time algorithm for this problem.

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Year:  1997        PMID: 9228614     DOI: 10.1089/cmb.1997.4.157

Source DB:  PubMed          Journal:  J Comput Biol        ISSN: 1066-5277            Impact factor:   1.479


  1 in total

1.  Expansion of gene clusters, circular orders, and the shortest Hamiltonian path problem.

Authors:  Sonja J Prohaska; Sarah J Berkemer; Fabian Gärtner; Thomas Gatter; Nancy Retzlaff; Christian Höner Zu Siederdissen; Peter F Stadler
Journal:  J Math Biol       Date:  2017-12-19       Impact factor: 2.259

  1 in total

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