Literature DB >> 9215897

Topological constraints on transvection between white genes within the transposing element TE35B in Drosophila melanogaster.

D Gubb1, J Roote, J Trenear, D Coulson, M Ashburner.   

Abstract

The transposable element TE35B carries two copies of the white (w) gene at 35B1.2 on the second chromosome. These w genes are suppressed in zeste-1 (z1) mutant background in a synapsis-dependent manner. Single-copy derivatives of the original TE35B stock give red eyes when heterozygous, but zeste eyes when homozygous. TE35B derivatives carrying single, double or triple copies of w were crossed to generate flies carrying from two to five ectopic w genes. Within this range, z1-mediated suppression is insensitive to copynumber and does not distinguish between w genes that are in cis or in trans. Suppression does not require the juxtaposition of even numbers of w genes, but is extremely sensitive to chromosomal topology. When arranged in a tight cluster, in triple-copy TE derivatives, w genes are nonsuppressible. Breakpoints falling within TE35B and separating two functional w genes act as partial suppressors of z1. Similarly, breakpoints immediately proximal or distal to both w genes give partial suppression. This transvection-dependent downregulation of w genes may result from mis-activation of the X-chromosome dosage compensation mechanism.

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Year:  1997        PMID: 9215897      PMCID: PMC1208061     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  36 in total

1.  The molecular structure of TE146 and its derivatives in Drosophila melanogaster.

Authors:  R Lovering; N Harden; M Ashburner
Journal:  Genetics       Date:  1991-06       Impact factor: 4.562

2.  Perturbation of nuclear architecture by long-distance chromosome interactions.

Authors:  A F Dernburg; K W Broman; J C Fung; W F Marshall; J Philips; D A Agard; J W Sedat
Journal:  Cell       Date:  1996-05-31       Impact factor: 41.582

3.  Derivation-dependent distribution of insertion sites for a Drosophila transposon.

Authors:  G Ising; K Block
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1981

4.  Regulation of white locus expression: the structure of mutant alleles at the white locus of Drosophila melanogaster.

Authors:  Z Zachar; P M Bingham
Journal:  Cell       Date:  1982-09       Impact factor: 41.582

5.  Physical map of the white locus of Drosophila melanogaster.

Authors:  R Levis; P M Bingham; G M Rubin
Journal:  Proc Natl Acad Sci U S A       Date:  1982-01       Impact factor: 11.205

6.  Changes of zeste phenotype induced by autosomal mutations in Drosophila melanogaster.

Authors:  W E Kalisch; B Rasmuson
Journal:  Hereditas       Date:  1974       Impact factor: 3.271

7.  Eucaryotic transposable genetic elements with inverted terminal repeats.

Authors:  S Potter; M Truett; M Phillips; A Maher
Journal:  Cell       Date:  1980-07       Impact factor: 41.582

8.  The genetics of a small autosomal region of Drosophila melanogaster containing the structural gene for alcohol dehydrogenase. III. Hypomorphic and hypermorphic mutations affecting the expression of hairless.

Authors:  M Ashburner
Journal:  Genetics       Date:  1982 Jul-Aug       Impact factor: 4.562

9.  Transformation of white locus DNA in drosophila: dosage compensation, zeste interaction, and position effects.

Authors:  T Hazelrigg; R Levis; G M Rubin
Journal:  Cell       Date:  1984-02       Impact factor: 41.582

10.  Molecular analysis of large transposable elements carrying the white locus of Drosophila melanogaster.

Authors:  R Paro; M L Goldberg; W J Gehring
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

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  10 in total

1.  The balance between isoforms of the prickle LIM domain protein is critical for planar polarity in Drosophila imaginal discs.

Authors:  D Gubb; C Green; D Huen; D Coulson; G Johnson; D Tree; S Collier; J Roote
Journal:  Genes Dev       Date:  1999-09-01       Impact factor: 11.361

2.  Enhancer action in trans is permitted throughout the Drosophila genome.

Authors:  Ji-Long Chen; Kathryn L Huisinga; Michaela M Viering; Sharon A Ou; C-ting Wu; Pamela K Geyer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

3.  Enhancer choice in cis and in trans in Drosophila melanogaster: role of the promoter.

Authors:  James R Morris; Dmitri A Petrov; Anne M Lee; Chao-Ting Wu
Journal:  Genetics       Date:  2004-08       Impact factor: 4.562

4.  A genomewide survey argues that every zygotic gene product is dispensable for the initiation of somatic homolog pairing in Drosophila.

Authors:  Jack R Bateman; C-ting Wu
Journal:  Genetics       Date:  2008-09-14       Impact factor: 4.562

5.  Effects of chromosomal rearrangements on transvection at the yellow gene of Drosophila melanogaster.

Authors:  Sharon A Ou; Elaine Chang; Szexian Lee; Katherine So; C-ting Wu; James R Morris
Journal:  Genetics       Date:  2009-08-10       Impact factor: 4.562

6.  Two modes of transvection: enhancer action in trans and bypass of a chromatin insulator in cis.

Authors:  J R Morris; J L Chen; P K Geyer; C T Wu
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

7.  Dominant defects in Drosophila eye pigmentation resulting from a euchromatin-heterochromatin fusion gene.

Authors:  Y S Rong; K G Golic
Journal:  Genetics       Date:  1998-12       Impact factor: 4.562

8.  Disruption of topoisomerase II perturbs pairing in drosophila cell culture.

Authors:  Benjamin R Williams; Jack R Bateman; Natasha D Novikov; C-Ting Wu
Journal:  Genetics       Date:  2007-09       Impact factor: 4.562

9.  An analysis of transvection at the yellow locus of Drosophila melanogaster.

Authors:  J R Morris; J Chen; S T Filandrinos; R C Dunn; R Fisk; P K Geyer; C Wu
Journal:  Genetics       Date:  1999-02       Impact factor: 4.562

10.  Identification of genes that promote or antagonize somatic homolog pairing using a high-throughput FISH-based screen.

Authors:  Eric F Joyce; Benjamin R Williams; Tiao Xie; C-Ting Wu
Journal:  PLoS Genet       Date:  2012-05-10       Impact factor: 5.917

  10 in total

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