Literature DB >> 9207100

Direct isolation of human BRCA2 gene by transformation-associated recombination in yeast.

V Larionov1, N Kouprina, G Solomon, J C Barrett, M A Resnick.   

Abstract

Mutant forms of the BRCA2 gene contribute significantly to hereditary breast cancer. Isolation of the normal and mutant forms of the BRCA2 gene with its natural promoter would greatly facilitate analysis of the gene and its contribution to breast cancer. We have accomplished the direct isolation of the 90-kb gene from total human DNA by transformation-associated recombination in yeast using a small amount of 5' and 3' BRCA2 sequence information. Because the entire isolation procedure of a single chromosomal gene could be accomplished in approximately 2 weeks, the transformation-associated recombination cloning approach is readily applicable to studies of chromosome alterations and human genetic diseases.

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Year:  1997        PMID: 9207100      PMCID: PMC23830          DOI: 10.1073/pnas.94.14.7384

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  Highly selective isolation of human DNAs from rodent-human hybrid cells as circular yeast artificial chromosomes by transformation-associated recombination cloning.

Authors:  V Larionov; N Kouprina; J Graves; M A Resnick
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

2.  Localization of a breast cancer susceptibility gene, BRCA2, to chromosome 13q12-13.

Authors:  R Wooster; S L Neuhausen; J Mangion; Y Quirk; D Ford; N Collins; K Nguyen; S Seal; T Tran; D Averill
Journal:  Science       Date:  1994-09-30       Impact factor: 47.728

3.  Induction of recombination between homologous and diverged DNAs by double-strand gaps and breaks and role of mismatch repair.

Authors:  S D Priebe; J Westmoreland; T Nilsson-Tillgren; M A Resnick
Journal:  Mol Cell Biol       Date:  1994-07       Impact factor: 4.272

4.  Transformation-associated recombination between diverged and homologous DNA repeats is induced by strand breaks.

Authors:  V Larionov; N Kouprina; M Eldarov; E Perkins; G Porter; M A Resnick
Journal:  Yeast       Date:  1994-01       Impact factor: 3.239

5.  Recombination during transformation as a source of chimeric mammalian artificial chromosomes in yeast (YACs).

Authors:  V Larionov; N Kouprina; N Nikolaishvili; M A Resnick
Journal:  Nucleic Acids Res       Date:  1994-10-11       Impact factor: 16.971

6.  Eukaryotic DNA segments capable of autonomous replication in yeast.

Authors:  D T Stinchcomb; M Thomas; J Kelly; E Selker; R W Davis
Journal:  Proc Natl Acad Sci U S A       Date:  1980-08       Impact factor: 11.205

7.  Efficient manipulation of the human adenovirus genome as an infectious yeast artificial chromosome clone.

Authors:  G Ketner; F Spencer; S Tugendreich; C Connelly; P Hieter
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-21       Impact factor: 11.205

8.  Use of a ring chromosome and pulsed-field gels to study interhomolog recombination, double-strand DNA breaks and sister-chromatid exchange in yeast.

Authors:  J C Game; K C Sitney; V E Cook; R K Mortimer
Journal:  Genetics       Date:  1989-12       Impact factor: 4.562

9.  Recombination between similar but not identical DNA sequences during yeast transformation occurs within short stretches of identity.

Authors:  C Mézard; D Pompon; A Nicolas
Journal:  Cell       Date:  1992-08-21       Impact factor: 41.582

10.  Genetic analysis of breast cancer in the cancer and steroid hormone study.

Authors:  E B Claus; N Risch; W D Thompson
Journal:  Am J Hum Genet       Date:  1991-02       Impact factor: 11.025

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  39 in total

1.  A genetic system for direct selection of gene-positive clones during recombinational cloning in yeast.

Authors:  Vladimir Noskov; Natalay Kouprina; Sun-Hee Leem; Maxim Koriabine; J Carl Barrett; Vladimir Larionov
Journal:  Nucleic Acids Res       Date:  2002-01-15       Impact factor: 16.971

2.  Optimum conditions for selective isolation of genes from complex genomes by transformation-associated recombination cloning.

Authors:  Sun-Hee Leem; Vladimir N Noskov; Jung-Eun Park; Seung Il Kim; Vladimir Larionov; Natalay Kouprina
Journal:  Nucleic Acids Res       Date:  2003-03-15       Impact factor: 16.971

3.  Closing the gaps on human chromosome 19 revealed genes with a high density of repetitive tandemly arrayed elements.

Authors:  Sun-Hee Leem; Natalay Kouprina; Jane Grimwood; Jung-Hyun Kim; Michael Mullokandov; Young-Ho Yoon; Ji-Youn Chae; Jenna Morgan; Susan Lucas; Paul Richardson; Chris Detter; Tijana Glavina; Eddy Rubin; J Carl Barrett; Vladimir Larionov
Journal:  Genome Res       Date:  2004-01-12       Impact factor: 9.043

Review 4.  PCR-based methods facilitate targeted gene manipulations and cloning procedures.

Authors:  Jürgen Wendland
Journal:  Curr Genet       Date:  2003-08-19       Impact factor: 3.886

5.  Rapid cloning of mouse DNA as yeast artificial chromosomes by transformation-associated recombination (TAR).

Authors:  M R Cancilla; J Graves; L E Matesic; R H Reeves; K M Tainton; K H Choo; M A Resnick; V L Larionov; N Y Kouprina
Journal:  Mamm Genome       Date:  1998-02       Impact factor: 2.957

6.  Transferring whole genomes from bacteria to yeast spheroplasts using entire bacterial cells to reduce DNA shearing.

Authors:  Bogumil J Karas; Jelena Jablanovic; Edward Irvine; Lijie Sun; Li Ma; Philip D Weyman; Daniel G Gibson; John I Glass; J Craig Venter; Clyde A Hutchison; Hamilton O Smith; Yo Suzuki
Journal:  Nat Protoc       Date:  2014-03-06       Impact factor: 13.491

7.  Direct cloning and refactoring of a silent lipopeptide biosynthetic gene cluster yields the antibiotic taromycin A.

Authors:  Kazuya Yamanaka; Kirk A Reynolds; Roland D Kersten; Katherine S Ryan; David J Gonzalez; Victor Nizet; Pieter C Dorrestein; Bradley S Moore
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

8.  Selective isolation of large segments from individual microbial genomes and environmental DNA samples using transformation-associated recombination cloning in yeast.

Authors:  Natalay Kouprina; Vladimir N Noskov; Vladimir Larionov
Journal:  Nat Protoc       Date:  2020-01-31       Impact factor: 13.491

9.  Cloning whole bacterial genomes in yeast.

Authors:  Gwynedd A Benders; Vladimir N Noskov; Evgeniya A Denisova; Carole Lartigue; Daniel G Gibson; Nacyra Assad-Garcia; Ray-Yuan Chuang; William Carrera; Monzia Moodie; Mikkel A Algire; Quang Phan; Nina Alperovich; Sanjay Vashee; Chuck Merryman; J Craig Venter; Hamilton O Smith; John I Glass; Clyde A Hutchison
Journal:  Nucleic Acids Res       Date:  2010-03-07       Impact factor: 16.971

10.  A novel strategy for analysis of gene homologues and segmental genome duplications.

Authors:  Vladimir N Noskov; Sun-Hee Leem; Greg Solomon; Michael Mullokandov; Ji-Youn Chae; Young-Ho Yoon; Young-Sun Shin; Natalay Kouprina; Vladimir Larionov
Journal:  J Mol Evol       Date:  2003-06       Impact factor: 2.395

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