Literature DB >> 9204274

Protein-facilitated RNA folding.

K M Weeks1.   

Abstract

In the absence of protein collaborators, both simple and complex RNAs often misfold or are unfolded. Biologically important RNAs solve their folding problem, in part, using the assistance of chaperone and cofactor proteins. Recent work emphasizes several rules for RNA-protein complexes: formation involves induced fit; many large RNAs fold slowly; and ribonucleoprotein assembly requires multiple steps. Finally, protein binding can introduce thermodynamic side effects.

Mesh:

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Year:  1997        PMID: 9204274     DOI: 10.1016/s0959-440x(97)80048-6

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  48 in total

1.  Molecular dynamics simulations of the complex between human U1A protein and hairpin II of U1 small nuclear RNA and of free RNA in solution.

Authors:  Y Tang; L Nilsson
Journal:  Biophys J       Date:  1999-09       Impact factor: 4.033

2.  The bI4 group I intron binds directly to both its protein splicing partners, a tRNA synthetase and maturase, to facilitate RNA splicing activity.

Authors:  S B Rho; S A Martinis
Journal:  RNA       Date:  2000-12       Impact factor: 4.942

3.  Polymerization defects within human telomerase are distinct from telomerase RNA and TEP1 binding.

Authors:  T L Beattie; W Zhou; M O Robinson; L Harrington
Journal:  Mol Biol Cell       Date:  2000-10       Impact factor: 4.138

4.  Recruitment of intron-encoded and co-opted proteins in splicing of the bI3 group I intron RNA.

Authors:  Gurminder S Bassi; Daniela M de Oliveira; Malcolm F White; Kevin M Weeks
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-02       Impact factor: 11.205

5.  Design and development of a catalytic ribonucleoprotein.

Authors:  S Atsumi; Y Ikawa; H Shiraishi; T Inoue
Journal:  EMBO J       Date:  2001-10-01       Impact factor: 11.598

6.  Rearrangement of structured RNA via branch migration structures catalysed by the highly related DEAD-box proteins p68 and p72.

Authors:  O G Rössler; A Straka; H Stahl
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

7.  Expression of hTERT and hTR in cis reconstitutes and active human telomerase ribonucleoprotein.

Authors:  F Bachand; G Kukolj; C Autexier
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

8.  Nonhierarchical ribonucleoprotein assembly suggests a strain-propagation model for protein-facilitated RNA folding.

Authors:  Caia D S Duncan; Kevin M Weeks
Journal:  Biochemistry       Date:  2010-07-06       Impact factor: 3.162

9.  FinO is an RNA chaperone that facilitates sense-antisense RNA interactions.

Authors:  David C Arthur; Alexandru F Ghetu; Michael J Gubbins; Ross A Edwards; Laura S Frost; J N Mark Glover
Journal:  EMBO J       Date:  2003-12-01       Impact factor: 11.598

10.  Group II intron splicing factors derived by diversification of an ancient RNA-binding domain.

Authors:  Gerard J Ostheimer; Rosalind Williams-Carrier; Susan Belcher; Erin Osborne; Jennifer Gierke; Alice Barkan
Journal:  EMBO J       Date:  2003-08-01       Impact factor: 11.598

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