Literature DB >> 9203407

Efficiency of the polymerase chain reaction amplification of the uid gene for detection of Escherichia coli in contaminated water.

S Iqbal1, J Robinson, D Deere, J R Saunders, C Edwards, J Porter.   

Abstract

Direct detection of Escherichia coli from polluted river water was achieved using polymerase chain reaction (PCR) amplification of the uid gene. Amplification using DNA from environmental samples resulted in non-specific DNA fragments. Specific amplification was achieved through use of the touch-down PCR procedure. Targeting the uidA structural region of the gene gave reproducibly better amplification than targeting the uidR regulatory region. The data demonstrate conditions for optimal specific detection.

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Year:  1997        PMID: 9203407     DOI: 10.1046/j.1472-765x.1997.00160.x

Source DB:  PubMed          Journal:  Lett Appl Microbiol        ISSN: 0266-8254            Impact factor:   2.858


  6 in total

1.  Simultaneous detection and differentiation of Escherichia coli populations from environmental freshwaters by means of sequence variations in a fragment of the beta-D-glucuronidase gene.

Authors:  A H Farnleitner; N Kreuzinger; G G Kavka; S Grillenberger; J Rath; R L Mach
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

2.  Comparison of antibiotic resistant Escherichia coli obtained from drinking water sources in northern Tanzania: a cross-sectional study.

Authors:  Beatus Lyimo; Joram Buza; Murugan Subbiah; Woutrina Smith; Douglas R Call
Journal:  BMC Microbiol       Date:  2016-11-03       Impact factor: 3.605

Review 3.  Recent developments in detection and enumeration of waterborne bacteria: a retrospective minireview.

Authors:  Rehan A Deshmukh; Kopal Joshi; Sunil Bhand; Utpal Roy
Journal:  Microbiologyopen       Date:  2016-07-10       Impact factor: 3.139

4.  Antibiotic Resistance in an Indian Rural Community: A 'One-Health' Observational Study on Commensal Coliform from Humans, Animals, and Water.

Authors:  Manju Raj Purohit; Salesh Chandran; Harshada Shah; Vishal Diwan; Ashok J Tamhankar; Cecilia Stålsby Lundborg
Journal:  Int J Environ Res Public Health       Date:  2017-04-06       Impact factor: 3.390

5.  Antibiotic resistance and phylogenetic profiling of Escherichia coli from dairy farm soils; organic versus conventional systems.

Authors:  Omega Y Amoafo; Vanita Malekar; Eirian Jones; Stephen L W On
Journal:  Curr Res Microb Sci       Date:  2021-12-10

6.  IncF Plasmids Are Commonly Carried by Antibiotic Resistant Escherichia coli Isolated from Drinking Water Sources in Northern Tanzania.

Authors:  Beatus Lyimo; Joram Buza; Murugan Subbiah; Sylivester Temba; Honest Kipasika; Woutrina Smith; Douglas R Call
Journal:  Int J Microbiol       Date:  2016-03-24
  6 in total

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