Literature DB >> 9180697

Indolepyruvate ferredoxin oxidoreductase from Pyrococcus sp. KOD1 possesses a mosaic structure showing features of various oxidoreductases.

M A Siddiqui1, S Fujiwara, T Imanaka.   

Abstract

Indolepyruvate ferredoxin oxidoreductase (IOR) catalyzes the oxidative decarboxylation of arylpyruvates. Gene cloning and sequencing analysis of the IOR gene from the hyperthermophilic archaeon Pyrococcus sp. KOD1 was performed. Two genes, iorA and iorB. encoding alpha and beta subunits of IOR were found to be tandemly arranged, which suggests that gene expression is translationally coupled. Sequence analysis showed the C-terminal region of the alpha subunit to have a typical ferredoxin-type [4Fe-4S] cluster motif (CXXCXXCXXCXXXCP), which is similar to that present in the delta subunits of other oxidoreductases such as pyruvate ferredoxin oxidoreductase (POR) and 2-ketoisovalerate ferredoxin oxidoreductase (VOR). We suggest that the alpha subunit of KOD1-IOR has a mosaic structure composed of features characteristic of the alpha, beta and delta subunits from POR and VOR. KOD1-IOR was overproduced in anaerobically incubated Escherichia coli cells and the crude enzyme was extracted under anaerobic conditions. The optimal temperature for activity of recombinant IOR was 70 degrees C and the half-life of this enzyme in the presence of air was 15 min at 25 degrees C.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9180697     DOI: 10.1007/pl00008607

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  6 in total

1.  Genetic analysis of the upper phenylacetate catabolic pathway in the production of tropodithietic acid by Phaeobacter gallaeciensis.

Authors:  Martine Berger; Nelson L Brock; Heiko Liesegang; Marco Dogs; Ines Preuth; Meinhard Simon; Jeroen S Dickschat; Thorsten Brinkhoff
Journal:  Appl Environ Microbiol       Date:  2012-03-09       Impact factor: 4.792

2.  Genetic examination of initial amino acid oxidation and glutamate catabolism in the hyperthermophilic archaeon Thermococcus kodakarensis.

Authors:  Yuusuke Yokooji; Takaaki Sato; Shinsuke Fujiwara; Tadayuki Imanaka; Haruyuki Atomi
Journal:  J Bacteriol       Date:  2013-02-22       Impact factor: 3.490

3.  Characterization of DNA polymerase from Pyrococcus sp. strain KOD1 and its application to PCR.

Authors:  M Takagi; M Nishioka; H Kakihara; M Kitabayashi; H Inoue; B Kawakami; M Oka; T Imanaka
Journal:  Appl Environ Microbiol       Date:  1997-11       Impact factor: 4.792

4.  Two biosynthetic pathways for aromatic amino acids in the archaeon Methanococcus maripaludis.

Authors:  Iris Porat; Brian W Waters; Quincy Teng; William B Whitman
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

5.  Helicobacter pylori porCDAB and oorDABC genes encode distinct pyruvate:flavodoxin and 2-oxoglutarate:acceptor oxidoreductases which mediate electron transport to NADP.

Authors:  N J Hughes; C L Clayton; P A Chalk; D J Kelly
Journal:  J Bacteriol       Date:  1998-03       Impact factor: 3.490

6.  Transcriptomic analysis of the highly efficient oil-degrading bacterium Acinetobacter venetianus RAG-1 reveals genes important in dodecane uptake and utilization.

Authors:  Ankita Kothari; Marimikel Charrier; Yu-Wei Wu; Stephanie Malfatti; Carol E Zhou; Steven W Singer; Larry Dugan; Aindrila Mukhopadhyay
Journal:  FEMS Microbiol Lett       Date:  2016-09-22       Impact factor: 2.742

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.