Literature DB >> 9180374

A histidine variant of yeast iso-1-cytochrome c that strongly affects the energetics of the denatured state.

S Godbole1, B E Bowler.   

Abstract

Iso-1-cytochrome c has been engineered to remove all histidine residues not involved in heme ligation in the native state to produce a variant designated TM. Single histidine residues were then introduced at positions 26, TM + His26, and 54, TM + His54. Since histidine residues not involved in native state heme ligation are known to replace the methionine 80 heme ligand in denatured cytochrome c, these variants were expected to affect the structure of the denatured state. Guanidine hydrochloride denaturations were performed to assess the stability of these proteins relative to the wild-type protein. The free energy difference for heme ligation in the denatured state was assessed by pH titration. The experimentally observed mutation-induced change (delta deltaG(D-state)) in the free energy of heme ligation for unfolded TM + His54 versus TM + His26 is -0.4 kcal/mol. The expected mutation-induced change in delta deltaG(D-state) calculated for a random coil unfolded state is +2 kcal/mol. Thus, unfolded TM + His54 has residual structure stabilizing its denatured state by -2.4 kcal/mol relative to TM + His26. The results imply that the denatured state can contribute significantly to mutation-induced changes in the free energy of unfolding of a protein.

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Year:  1997        PMID: 9180374     DOI: 10.1006/jmbi.1997.0999

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  10 in total

1.  Effect of an Imposed Contact on Secondary Structure in the Denatured State of Yeast Iso-1-cytochrome c.

Authors:  Travis A Danielson; Jessica M Stine; Tanveer A Dar; Klara Briknarova; Bruce E Bowler
Journal:  Biochemistry       Date:  2017-12-08       Impact factor: 3.162

2.  Helical Propensity Affects the Conformational Properties of the Denatured State of Cytochrome c'.

Authors:  Travis A Danielson; Bruce E Bowler
Journal:  Biophys J       Date:  2018-01-23       Impact factor: 4.033

3.  Equilibrium unfolding of a small low-potential cytochrome, cytochrome c553 from Desulfovibrio vulgaris.

Authors:  P Wittung-Stafshede
Journal:  Protein Sci       Date:  1999-07       Impact factor: 6.725

4.  Manifestations of native topology in the denatured state ensemble of Rhodopseudomonas palustris cytochrome c'.

Authors:  Tanveer A Dar; R Dustin Schaeffer; Valerie Daggett; Bruce E Bowler
Journal:  Biochemistry       Date:  2011-01-20       Impact factor: 3.162

5.  Propensities of aromatic amino acids versus leucine and proline to induce residual structure in the denatured-state ensemble of iso-1-cytochrome c.

Authors:  Michaela L Finnegan; Bruce E Bowler
Journal:  J Mol Biol       Date:  2010-09-17       Impact factor: 5.469

6.  Scaling properties of glycine-rich sequences in guanidine hydrochloride solutions.

Authors:  Michaela L Finnegan; Bruce E Bowler
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

7.  Sequence composition effects on denatured state loop formation in iso-1-cytochrome c variants: polyalanine versus polyglycine inserts.

Authors:  Franco O Tzul; Eydiejo Kurchan; Bruce E Bowler
Journal:  J Mol Biol       Date:  2007-04-27       Impact factor: 5.469

8.  Effect of temperature and guanidine hydrochloride on ferrocytochrome c at neutral pH.

Authors:  Rastislav Varhac; Marián Antalík; Mikulás Bánó
Journal:  J Biol Inorg Chem       Date:  2003-10-28       Impact factor: 3.358

9.  Conformational properties of polyglutamine sequences in guanidine hydrochloride solutions.

Authors:  Md Khurshid Alam Khan; Bruce E Bowler
Journal:  Biophys J       Date:  2012-11-07       Impact factor: 4.033

10.  Denatured State Conformational Biases in Three-Helix Bundles Containing Divergent Sequences Localize near Turns and Helix Capping Residues.

Authors:  Moses J Leavens; Lisa E Spang; Melisa M Cherney; Bruce E Bowler
Journal:  Biochemistry       Date:  2021-10-04       Impact factor: 3.321

  10 in total

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