Literature DB >> 9177206

Promoter analysis in living zebrafish embryos identifies a cis-acting motif required for neuronal expression of GATA-2.

A Meng1, H Tang, B A Ong, M J Farrell, S Lin.   

Abstract

We have used zebrafish embryos to dissect the promoter activity of a gene with a complex expression pattern during embryogenesis. GATA-2 is a transcription factor required for hematopoiesis and is dynamically expressed in hematopoietic tissues and in the central nervous system. Using constructs containing zebrafish GATA-2 genomic flanking sequences and the green fluorescent protein (GFP) reporter gene, we demonstrate that distinct regulatory domains are required for hematopoietic, enveloping layer (EVL), and neuronal expression of GATA-2. During gastrulation, GFP expression is confined to the ventral ectoderm and lateral mesoderm and is lacking in the dorsal shield. Cells derived from the regions expressing GFP give rise to hematopoietic progenitors, EVL cells, and neurons. Deletion analysis of the 7.3-kb GATA-2 promoter region revealed that a 1.1-kb DNA sequence is critical for expression of GATA-2 in neurons. Fine mapping revealed that a 31-bp region is required for neuron enhancer activity, and mutagenesis showed that the DNA motif CCCTCCT is essential for GATA-2 promoter activity in the central nervous system of zebrafish. Our use of zebrafish embryos can be exploited as a whole animal system for the dissection of any developmentally regulated vertebrate promoter.

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Year:  1997        PMID: 9177206      PMCID: PMC21038          DOI: 10.1073/pnas.94.12.6267

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

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Journal:  Genes Dev       Date:  1990-11       Impact factor: 11.361

Review 2.  GATA-binding transcription factors in hematopoietic cells.

Authors:  S H Orkin
Journal:  Blood       Date:  1992-08-01       Impact factor: 22.113

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Authors:  P Culp; C Nüsslein-Volhard; N Hopkins
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4.  Activity of the distal positive element of the peripherin gene is dependent on proteins binding to an Ets-like recognition site and a novel inverted repeat site.

Authors:  L Chang; M A Thompson
Journal:  J Biol Chem       Date:  1996-03-15       Impact factor: 5.157

5.  FACS-optimized mutants of the green fluorescent protein (GFP).

Authors:  B P Cormack; R H Valdivia; S Falkow
Journal:  Gene       Date:  1996       Impact factor: 3.688

6.  GATA factors are essential for activity of the neuron-specific enhancer of the gonadotropin-releasing hormone gene.

Authors:  M A Lawson; D B Whyte; P L Mellon
Journal:  Mol Cell Biol       Date:  1996-07       Impact factor: 4.272

7.  Specific activation of mammalian Hox promoters in mosaic transgenic zebrafish.

Authors:  M Westerfield; J Wegner; B G Jegalian; E M DeRobertis; A W Püschel
Journal:  Genes Dev       Date:  1992-04       Impact factor: 11.361

Review 8.  Hematopoiesis: how does it happen?

Authors:  S H Orkin
Journal:  Curr Opin Cell Biol       Date:  1995-12       Impact factor: 8.382

Review 9.  Genetics and early development of zebrafish.

Authors:  C B Kimmel
Journal:  Trends Genet       Date:  1989-08       Impact factor: 11.639

10.  Expression of GATA-binding proteins during embryonic development in Xenopus laevis.

Authors:  L I Zon; C Mather; S Burgess; M E Bolce; R M Harland; S H Orkin
Journal:  Proc Natl Acad Sci U S A       Date:  1991-12-01       Impact factor: 11.205

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  47 in total

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2.  Green fluorescent protein (GFP) transgenic fish and their applications.

Authors:  Z Gong; B Ju; H Wan
Journal:  Genetica       Date:  2001       Impact factor: 1.082

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Authors:  Esther Fujimoto; Tamara J Stevenson; Chi-Bin Chien; Joshua L Bonkowsky
Journal:  Dev Biol       Date:  2011-01-27       Impact factor: 3.582

4.  Differences in protein mobility between pioneer versus follower growth cones.

Authors:  Rajan P Kulkarni; Magdalena Bak-Maier; Scott E Fraser
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-17       Impact factor: 11.205

5.  Upstream regulatory region of zebrafish lunatic fringe: isolation and promoter analysis.

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Journal:  Mar Biotechnol (NY)       Date:  2006-05-26       Impact factor: 3.619

6.  Regulatory divergence of the duplicated chromosomal loci sox11a/b by subpartitioning and sequence evolution of enhancers in zebrafish.

Authors:  Pavla Navratilova; David Fredman; Boris Lenhard; Thomas S Becker
Journal:  Mol Genet Genomics       Date:  2009-12-29       Impact factor: 3.291

7.  Modification of bacterial artificial chromosomes through chi-stimulated homologous recombination and its application in zebrafish transgenesis.

Authors:  J R Jessen; A Meng; R J McFarlane; B H Paw; L I Zon; G R Smith; S Lin
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

8.  Robust Identification of Developmentally Active Endothelial Enhancers in Zebrafish Using FANS-Assisted ATAC-Seq.

Authors:  Aurelie Quillien; Mary Abdalla; Jun Yu; Jianhong Ou; Lihua Julie Zhu; Nathan D Lawson
Journal:  Cell Rep       Date:  2017-07-18       Impact factor: 9.423

9.  The maternal CCAAT box transcription factor which controls GATA-2 expression is novel and developmentally regulated and contains a double-stranded-RNA-binding subunit.

Authors:  R L Orford; C Robinson; J M Haydon; R K Patient; M J Guille
Journal:  Mol Cell Biol       Date:  1998-09       Impact factor: 4.272

10.  Exonic remnants of whole-genome duplication reveal cis-regulatory function of coding exons.

Authors:  Xianjun Dong; Pavla Navratilova; David Fredman; Øyvind Drivenes; Thomas S Becker; Boris Lenhard
Journal:  Nucleic Acids Res       Date:  2009-12-06       Impact factor: 16.971

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