Literature DB >> 9175428

Protein conformational substates from X-ray crystallography.

P A Rejto1, S T Freer.   

Abstract

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Year:  1996        PMID: 9175428     DOI: 10.1016/s0079-6107(97)85629-5

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


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  11 in total

1.  Deciphering common failures in molecular docking of ligand-protein complexes.

Authors:  G M Verkhivker; D Bouzida; D K Gehlhaar; P A Rejto; S Arthurs; A B Colson; S T Freer; V Larson; B A Luty; T Marrone; P W Rose
Journal:  J Comput Aided Mol Des       Date:  2000-11       Impact factor: 3.686

2.  Flexibility and packing in proteins.

Authors:  Bertil Halle
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

3.  Vaccinia virus virulence factor N1L is a novel promising target for antiviral therapeutic intervention.

Authors:  Anton V Cheltsov; Mika Aoyagi; Alexander Aleshin; Eric Chi-Wang Yu; Taylor Gilliland; Dayong Zhai; Andrey A Bobkov; John C Reed; Robert C Liddington; Ruben Abagyan
Journal:  J Med Chem       Date:  2010-05-27       Impact factor: 7.446

4.  Use of decoys to optimize an all-atom force field including hydration.

Authors:  Yelena A Arnautova; Harold A Scheraga
Journal:  Biophys J       Date:  2008-05-23       Impact factor: 4.033

5.  Exploring structural variability in X-ray crystallographic models using protein local optimization by torsion-angle sampling.

Authors:  Jennifer L Knight; Zhiyong Zhou; Emilio Gallicchio; Daniel M Himmel; Richard A Friesner; Eddy Arnold; Ronald M Levy
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-03-19

6.  Modeling discrete heterogeneity in X-ray diffraction data by fitting multi-conformers.

Authors:  Henry van den Bedem; Ankur Dhanik; Jean Claude Latombe; Ashley M Deacon
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-09-16

7.  Implementing electrostatic polarization cannot fill the gap between experimental and theoretical measurements for the ultrafast fluorescence decay of myoglobin.

Authors:  Bingbing Lin; Ya Gao; Yongxiu Li; John Z H Zhang; Ye Mei
Journal:  J Mol Model       Date:  2014-03-27       Impact factor: 1.810

Review 8.  Integrative, dynamic structural biology at atomic resolution--it's about time.

Authors:  Henry van den Bedem; James S Fraser
Journal:  Nat Methods       Date:  2015-04       Impact factor: 28.547

9.  X-ray refinement significantly underestimates the level of microscopic heterogeneity in biomolecular crystals.

Authors:  Antonija Kuzmanic; Navraj S Pannu; Bojan Zagrovic
Journal:  Nat Commun       Date:  2014       Impact factor: 14.919

Review 10.  Identifying and Visualizing Macromolecular Flexibility in Structural Biology.

Authors:  Martina Palamini; Anselmo Canciani; Federico Forneris
Journal:  Front Mol Biosci       Date:  2016-09-09
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