Literature DB >> 9173891

Stability of a thermophilic TIM-barrel enzyme: indole-3-glycerol phosphate synthase from the thermophilic archaeon Sulfolobus solfataricus.

G Andreotti1, M V Cubellis, M D Palo, D Fessas, G Sannia, G Marino.   

Abstract

The stability and activity of indole-3-glycerol phosphate synthase from Sulfolobus solfataricus were studied as a function of pH and temperature. In this paper we focus on three points: (1) the long-term stability of the protein to irreversible denaturation at high temperature; (2) the short-term stability of the protein to reversible temperature-driven unfolding; and (3) the dependence of its activity on temperature. Results can be summarized as follows: (a) the same first-order kinetic constant (0.020+/-0.003 min-1) was determined at different pH values (6.5, 8.0 and 9.5) from long-term stability experiments at 80 degrees C; (b) short-term stability experiments revealed different behaviour in two different pH ranges (6.5-8.0, 8.5-9.5), suggesting that the melting temperature is higher at alkaline than at neutral pH; (c) the dependence of activity on temperature was investigated at pH 7.0 and 9.0, and a discontinuity was observed in the Arrhenius plot of kcat values at pH 9.0. We also investigated the stability in the presence of guanidinium chloride at 20 degrees C either at pH 7.0 or at pH 9.0, and we present data that indicate that the unfolding mechanism closely approaches a two-state model at pH 7.0 and a more complex mechanism at pH 9.0. Satisfactory fitting of the equilibrium unfolding transition obtained by fluorescence measurements at pH 9.0 required a model that involves a stable intermediate in addition to the native and unfolded forms. At 20 degrees C the folded conformation is more stable than the unfolded conformation by (14. 7+/-1.2) kJ/mol at pH 7.0 and by (25.5+/-1.8) kJ/mol at pH 9.0.

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Year:  1997        PMID: 9173891      PMCID: PMC1218304          DOI: 10.1042/bj3230259

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  22 in total

1.  Phosphoribosylanthranilate isomerase-indoleglycerol-phosphate synthase from Escherichia coli.

Authors:  K Kirschner; H Szadkowski; T S Jardetzky; V Hager
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2.  Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants.

Authors:  M M Santoro; D W Bolen
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Review 3.  Protein denaturation. C. Theoretical models for the mechanism of denaturation.

Authors:  C Tanford
Journal:  Adv Protein Chem       Date:  1970

4.  Enzymes of the tryptophan operon of Bacillus subtilis.

Authors:  S O Hoch; C Anagnostopoulos; I P Crawford
Journal:  Biochem Biophys Res Commun       Date:  1969-06-27       Impact factor: 3.575

5.  Three-dimensional structure of the bifunctional enzyme N-(5'-phosphoribosyl)anthranilate isomerase-indole-3-glycerol-phosphate synthase from Escherichia coli.

Authors:  J P Priestle; M G Grütter; J L White; M G Vincent; M Kania; E Wilson; T S Jardetzky; K Kirschner; J N Jansonius
Journal:  Proc Natl Acad Sci U S A       Date:  1987-08       Impact factor: 11.205

6.  Limited proteolysis as a probe of conformational changes in aspartate aminotransferase from Sulfolobus solfataricus.

Authors:  M I Arnone; L Birolo; M Giamberini; M V Cubellis; G Nitti; G Sannia; G Marino
Journal:  Eur J Biochem       Date:  1992-03-15

7.  Hydrogen ion buffers for biological research.

Authors:  N E Good; G D Winget; W Winter; T N Connolly; S Izawa; R M Singh
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8.  Enzymes of the tryptophan synthetic pathway in Pseudomonas putida.

Authors:  T Enatsu; I P Crawford
Journal:  J Bacteriol       Date:  1968-01       Impact factor: 3.490

9.  Glutamate dehydrogenase from the hyperthermophile Pyrococcus furiosus. Thermal denaturation and activation.

Authors:  H Klump; J Di Ruggiero; M Kessel; J B Park; M W Adams; F T Robb
Journal:  J Biol Chem       Date:  1992-11-05       Impact factor: 5.157

10.  Thermostable NAD(+)-dependent alcohol dehydrogenase from Sulfolobus solfataricus: gene and protein sequence determination and relationship to other alcohol dehydrogenases.

Authors:  S Ammendola; C A Raia; C Caruso; L Camardella; S D'Auria; M De Rosa; M Rossi
Journal:  Biochemistry       Date:  1992-12-15       Impact factor: 3.162

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  7 in total

1.  Identifying the structural boundaries of independent folding domains in the alpha subunit of tryptophan synthase, a beta/alpha barrel protein.

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2.  Thermodynamic characterization of yeast triosephosphate isomerase refolding: insights into the interplay between function and stability as reasons for the oligomeric nature of the enzyme.

Authors:  Hugo Nájera; Miguel Costas; D Alejandro Fernández-Velasco
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3.  Folding and unfolding of gammaTIM monomers and dimers.

Authors:  Brijesh Patel; John M Finke
Journal:  Biophys J       Date:  2007-06-01       Impact factor: 4.033

4.  The progressive development of structure and stability during the equilibrium folding of the alpha subunit of tryptophan synthase from Escherichia coli.

Authors:  P J Gualfetti; O Bilsel; C R Matthews
Journal:  Protein Sci       Date:  1999-08       Impact factor: 6.725

5.  Equilibrium and kinetic folding pathways of a TIM barrel with a funneled energy landscape.

Authors:  John M Finke; José N Onuchic
Journal:  Biophys J       Date:  2005-04-15       Impact factor: 4.033

6.  Partial NMR assignments and secondary structure mapping of the isolated alpha subunit of Escherichia coli tryptophan synthase, a 29-kD TIM barrel protein.

Authors:  Ramakrishna Vadrevu; Christopher J Falzone; C Robert Matthews
Journal:  Protein Sci       Date:  2003-01       Impact factor: 6.725

7.  Comparative hydrogen-deuterium exchange for a mesophilic vs thermophilic dihydrofolate reductase at 25 °C: identification of a single active site region with enhanced flexibility in the mesophilic protein.

Authors:  Olayinka A Oyeyemi; Kevin M Sours; Thomas Lee; Amnon Kohen; Katheryn A Resing; Natalie G Ahn; Judith P Klinman
Journal:  Biochemistry       Date:  2011-08-30       Impact factor: 3.162

  7 in total

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