Literature DB >> 9165073

Chalcogen-analogs of amino acids. Their use in X-ray crystallographic and folding studies of peptides and proteins.

D Besse1, N Budisa, W Karnbrock, C Minks, H J Musiol, S Pegoraro, F Siedler, E Weyher, L Moroder.   

Abstract

Using methionine-auxotrophic Escherichia coli strains quantitative biosynthetic replacement of the methionine residues by seleno- and telluromethionine but not by methoxinine was achieved in various model proteins, clearly indicating a limited tolerance in the editing range of methionyl-tRNA synthetase. For expression of the protein variants the acetyl derivatives of the chalcogen-analogs of methionine, obtained by a new and highly efficient synthetic procedure, proved to be the ideal source in the growth media as they were found to be significantly more stable than the underivatized methionine analogs. The conformational properties in solution, the folding and unfolding parameters as well as X-ray crystallographic data confirmed the highly isomorphous character of the atomic mutants and thus the usefulness of this concept in X-ray analysis of proteins. Quantitative replacement of cysteine residues by selenocysteine has recently been achieved using cysteine-auxotrophic E. coli strains, but a selective replacement of cysteine residues by employing the natural translational machinery of selenocysteine is also conceivable. We have therefore performed a detailed study on synthetic selenocysteine-peptides in order to determine the redox potential of this cysteine analog, and thus the ability of related peptide and protein analogs to undergo the correct oxidative folding. Since the redox potential of selenocysteine was found to be significantly more reducing than that of the parent amino acid, selective formation of a diselenide bridge in presence of additional cysteine residues is highly favored as well documented in the case of the synthetic bis-selenocysteine-endothelin I analog. These results confirm that even cysteine residues may represent an interesting target for the design and expression of isomorphous heteroatomic analogs of proteins.

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Year:  1997        PMID: 9165073     DOI: 10.1515/bchm.1997.378.3-4.211

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  6 in total

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Authors:  Sibo Jiang; Jia Sheng; Zhen Huang
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2011-12

2.  The disulfide-coupled folding pathway of apamin as derived from diselenide-quenched analogs and intermediates.

Authors:  S Pegoraro; S Fiori; J Cramer; S Rudolph-Böhner; L Moroder
Journal:  Protein Sci       Date:  1999-08       Impact factor: 6.725

3.  Integrated oxidative folding of cysteine/selenocysteine containing peptides: improving chemical synthesis of conotoxins.

Authors:  Aleksandra Walewska; Min-Min Zhang; Jack J Skalicky; Doju Yoshikami; Baldomero M Olivera; Grzegorz Bulaj
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

4.  Generation of RNAi libraries for high-throughput screens.

Authors:  Julie Clark; Sheng Ding
Journal:  J Biomed Biotechnol       Date:  2006

Review 5.  Selenol protecting groups in organic chemistry: special emphasis on selenocysteine Se-protection in solid phase peptide synthesis.

Authors:  Stevenson Flemer
Journal:  Molecules       Date:  2011-04-18       Impact factor: 4.411

6.  In-Cell Synthesis of Bioorthogonal Alkene Tag S-Allyl-Homocysteine and Its Coupling with Reprogrammed Translation.

Authors:  Saba Nojoumi; Ying Ma; Sergej Schwagerus; Christian P R Hackenberger; Nediljko Budisa
Journal:  Int J Mol Sci       Date:  2019-05-09       Impact factor: 5.923

  6 in total

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