Literature DB >> 9139110

Prediction of the three-dimensional structure of the human Fas receptor by comparative molecular modeling.

J Bajorath1, A Aruffo.   

Abstract

The Fas antigen, a cell surface receptor belonging to the tumor necrosis factor receptor (TNFR) superfamily, triggers programmed cell death (apoptosis) in the immune system. The three-dimensional structure of Fas and molecular details of the interaction between Fas and its ligand are currently unknown. A three-dimensional model of the Fas extracellular region was generated by comparative modeling. Inverse folding analysis suggested good sequence-structure compatibility of the model and thus reasonable accuracy. The model was analyzed in the light of information provided by studies on TNFR and CD40, another member of the TNFR family, and the Fas ligand binding site was predicted.

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Year:  1997        PMID: 9139110     DOI: 10.1023/a:1008011024584

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  18 in total

1.  Schematic drawings of protein structures.

Authors:  J S Richardson
Journal:  Methods Enzymol       Date:  1985       Impact factor: 1.600

2.  Progressive sequence alignment as a prerequisite to correct phylogenetic trees.

Authors:  D F Feng; R F Doolittle
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

3.  Unraveling function in the TNF ligand and receptor families.

Authors:  B Beutler; C van Huffel
Journal:  Science       Date:  1994-04-29       Impact factor: 47.728

4.  Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features.

Authors:  W Kabsch; C Sander
Journal:  Biopolymers       Date:  1983-12       Impact factor: 2.505

Review 5.  Immune regulation by CD40 and its ligand GP39.

Authors:  T M Foy; A Aruffo; J Bajorath; J E Buhlmann; R J Noelle
Journal:  Annu Rev Immunol       Date:  1996       Impact factor: 28.527

6.  The polypeptide encoded by the cDNA for human cell surface antigen Fas can mediate apoptosis.

Authors:  N Itoh; S Yonehara; A Ishii; M Yonehara; S Mizushima; M Sameshima; A Hase; Y Seto; S Nagata
Journal:  Cell       Date:  1991-07-26       Impact factor: 41.582

7.  Dominant interfering Fas gene mutations impair apoptosis in a human autoimmune lymphoproliferative syndrome.

Authors:  G H Fisher; F J Rosenberg; S E Straus; J K Dale; L A Middleton; A Y Lin; W Strober; M J Lenardo; J M Puck
Journal:  Cell       Date:  1995-06-16       Impact factor: 41.582

8.  2 A crystal structure of an extracellular fragment of human CD40 ligand.

Authors:  M Karpusas; Y M Hsu; J H Wang; J Thompson; S Lederman; L Chess; D Thomas
Journal:  Structure       Date:  1995-10-15       Impact factor: 5.006

9.  Crystallographic evidence for dimerization of unliganded tumor necrosis factor receptor.

Authors:  J H Naismith; T Q Devine; B J Brandhuber; S R Sprang
Journal:  J Biol Chem       Date:  1995-06-02       Impact factor: 5.157

10.  The mouse Fas-ligand gene is mutated in gld mice and is part of a TNF family gene cluster.

Authors:  D H Lynch; M L Watson; M R Alderson; P R Baum; R E Miller; T Tough; M Gibson; T Davis-Smith; C A Smith; K Hunter
Journal:  Immunity       Date:  1994-05       Impact factor: 31.745

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  2 in total

1.  Analysis of Fas-ligand interactions using a molecular model of the receptor-ligand interface.

Authors:  J Bajorath
Journal:  J Comput Aided Mol Des       Date:  1999-07       Impact factor: 3.686

2.  Identification of amino acid residues important for ligand binding to Fas.

Authors:  G C Starling; J Bajorath; J Emswiler; J A Ledbetter; A Aruffo; P A Kiener
Journal:  J Exp Med       Date:  1997-04-21       Impact factor: 14.307

  2 in total

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