Literature DB >> 9138598

The ATP-binding site of Ca(2+)-ATPase revealed by electron image analysis.

K Yonekura1, D L Stokes, H Sasabe, C Toyoshima.   

Abstract

The location of the ATP-binding site of a P-type ion pump, Ca(2+)-ATPase from rabbit sarcoplasmic reticulum, was examined by cryoelectron microscopy. A nonhydrolyzable analog of ATP, beta, gamma-bidentate chromium (III) complex of ATP (CrATP), was used to stabilize the enzyme in the Ca(2+)-occluded state. Tubular crystals were then induced by vanadate in the presence of EGTA, keeping CrATP bound to the enzyme. The three-dimensional structures of the crystals were determined at 14 A resolution by cryoelectron microscopy and helical image analysis. Statistical comparison of the structures with and without CrATP showed clear and significant differences at the groove proposed previously as the ATP-binding pocket.

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Year:  1997        PMID: 9138598      PMCID: PMC1184488          DOI: 10.1016/S0006-3495(97)78752-6

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  48 in total

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Journal:  Biochim Biophys Acta       Date:  1996-05-06

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Journal:  Biochim Biophys Acta       Date:  1973-03-16

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Journal:  J Mol Biol       Date:  1969-04-14       Impact factor: 5.469

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Journal:  J Ultrastruct Res       Date:  1983-11

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Journal:  Eur J Biochem       Date:  1982-02

8.  Functional consequences of mutations of conserved amino acids in the beta-strand domain of the Ca2(+)-ATPase of sarcoplasmic reticulum.

Authors:  D M Clarke; T W Loo; D H MacLennan
Journal:  J Biol Chem       Date:  1990-08-25       Impact factor: 5.157

9.  Preparation and properties of chromium(III) adenosine 5'-triphosphate, chromium(III) adenosine 5'-diphosphate, and related chromium(III) complexes.

Authors:  D Dunaway-Mariano; W W Cleland
Journal:  Biochemistry       Date:  1980-04-01       Impact factor: 3.162

10.  Preparation of chromium(III) and cobalt(III) nucleotides as chirality probes and inhibitors.

Authors:  W W Cleland
Journal:  Methods Enzymol       Date:  1982       Impact factor: 1.600

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  12 in total

1.  Structure of Na+,K+-ATPase at 11-A resolution: comparison with Ca2+-ATPase in E1 and E2 states.

Authors:  W J Rice; H S Young; D W Martin; J R Sachs; D L Stokes
Journal:  Biophys J       Date:  2001-05       Impact factor: 4.033

2.  Modeling a dehalogenase fold into the 8-A density map for Ca(2+)-ATPase defines a new domain structure.

Authors:  D L Stokes; N M Green
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

3.  Locating phospholamban in co-crystals with Ca(2+)-ATPase by cryoelectron microscopy.

Authors:  H S Young; L R Jones; D L Stokes
Journal:  Biophys J       Date:  2001-08       Impact factor: 4.033

Review 4.  What the structure of a calcium pump tells us about its mechanism.

Authors:  A G Lee; J M East
Journal:  Biochem J       Date:  2001-06-15       Impact factor: 3.857

5.  Structure of the Ca2+ pump of sarcoplasmic reticulum: a view along the lipid bilayer at 9-A resolution.

Authors:  H Ogawa; D L Stokes; H Sasabe; C Toyoshima
Journal:  Biophys J       Date:  1998-07       Impact factor: 4.033

6.  Two-dimensional crystallization of Ca-ATPase by detergent removal.

Authors:  J J Lacapère; D L Stokes; A Olofsson; J L Rigaud
Journal:  Biophys J       Date:  1998-09       Impact factor: 4.033

7.  How to make tubular crystals by reconstitution of detergent-solubilized Ca2(+)-ATPase.

Authors:  H S Young; J L Rigaud; J J Lacapère; L G Reddy; D L Stokes
Journal:  Biophys J       Date:  1997-06       Impact factor: 4.033

8.  Fourier-Bessel reconstruction of helical assemblies.

Authors:  Ruben Diaz; William J Rice; David L Stokes
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

9.  Interaction of phosphatidic acid and phosphatidylserine with the Ca2+-ATPase of sarcoplasmic reticulum and the mechanism of inhibition.

Authors:  K A Dalton; J M East; S Mall; S Oliver; A P Starling; A G Lee
Journal:  Biochem J       Date:  1998-02-01       Impact factor: 3.857

10.  Multiclass maximum-likelihood symmetry determination and motif reconstruction of 3-D helical objects from projection images for electron microscopy.

Authors:  Seunghee Lee; Peter C Doerschuk; John E Johnson
Journal:  IEEE Trans Image Process       Date:  2011-02-17       Impact factor: 10.856

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