Literature DB >> 9137082

Sensitive in situ hybridization with catalyzed reporter deposition, streptavidin-Nanogold, and silver acetate autometallography: detection of single-copy human papillomavirus.

I Zehbe1, G W Hacker, H Su, C Hauser-Kronberger, J F Hainfeld, R Tubbs.   

Abstract

The usefulness of standard in situ hybridization for viral nucleic acid detection is occasionally limited by its sensitivity limit of 10 to 50 copies per cell. A modified version of the recently described signal amplification method, catalyzed reporter deposition (CARD), and its application to formalin-fixed cells and tissue sections is presented. Deposition of the reporter is facilitated by using horseradish peroxidase catalyzing the deposition of biotinylated tyramide on the location of the probe target. The biotin accumulation created is usually detected with streptavidin-labeled enzymes or fluorochromes. In the present investigation, this step was replaced by streptavidin-Nanogold and combined with silver acetate autometallography. This resulted in deep-black precipitation at positive in situ hybridized reaction sites. The sensitivity of this new approach was tested with a biotinylated, genomic probe specific for human papillomavirus (HPV)-16/18. SiHa cells, a cervical carcinoma-derived cell line with one to two HPV16 copies per cell, and 10 histologically confirmed cervical carcinomas were used for the study. All samples were previously HPV16 positive with solution polymerase chain reaction, but only two of the cervical carcinomas were positive with standard in situ hybridization with barely visible signals. When employing CARD-Nanogold, SiHa cells and 9 of 10 biopsies proved positive with marked signals. It is concluded that this nonisotopic method can detect single viral copies in situ in routinely fixed material and may have the potential to replace in situ polymerase chain reaction in many applications.

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Year:  1997        PMID: 9137082      PMCID: PMC1858216     

Source DB:  PubMed          Journal:  Am J Pathol        ISSN: 0002-9440            Impact factor:   4.307


  19 in total

1.  Detection of low copy human papilloma virus DNA and mRNA in routine paraffin sections of cervix by non-isotopic in situ hybridisation.

Authors:  J Burns; A K Graham; C Frank; K A Fleming; M F Evans; J O McGee
Journal:  J Clin Pathol       Date:  1987-08       Impact factor: 3.411

2.  Catalyzed reporter deposition, a novel method of signal amplification. II. Application to membrane immunoassays.

Authors:  M N Bobrow; K J Shaughnessy; G J Litt
Journal:  J Immunol Methods       Date:  1991-03-01       Impact factor: 2.303

3.  Covalent binding of formalin fixed paraffin embedded brain tissue sections to glass slides suitable for in situ hybridization.

Authors:  W W Tourtellotte; A N Verity; P Schmid; S Martinez; P Shapshak
Journal:  J Virol Methods       Date:  1987-02       Impact factor: 2.014

4.  Formation and detection of RNA-DNA hybrid molecules in cytological preparations.

Authors:  J G Gall; M L Pardue
Journal:  Proc Natl Acad Sci U S A       Date:  1969-06       Impact factor: 11.205

5.  Studies on a new human cell line (SiHa) derived from carcinoma of uterus. I. Its establishment and morphology.

Authors:  F Friedl; I Kimura; T Osato; Y Ito
Journal:  Proc Soc Exp Biol Med       Date:  1970-11

6.  Tumor antigen and human chorionic gonadotropin in CaSki cells: a new epidermoid cervical cancer cell line.

Authors:  R A Pattillo; R O Hussa; M T Story; A C Ruckert; M R Shalaby; R F Mattingly
Journal:  Science       Date:  1977-06-24       Impact factor: 47.728

7.  Amplification and detection of lentiviral DNA inside cells.

Authors:  A T Haase; E F Retzel; K A Staskus
Journal:  Proc Natl Acad Sci U S A       Date:  1990-07       Impact factor: 11.205

8.  Catalyzed reporter deposition, a novel method of signal amplification. Application to immunoassays.

Authors:  M N Bobrow; T D Harris; K J Shaughnessy; G J Litt
Journal:  J Immunol Methods       Date:  1989-12-20       Impact factor: 2.303

9.  Detection of human papillomavirus DNA in formalin-fixed tissues by in situ hybridization after amplification by polymerase chain reaction.

Authors:  G J Nuovo; P MacConnell; A Forde; P Delvenne
Journal:  Am J Pathol       Date:  1991-10       Impact factor: 4.307

10.  Sensitivity of in situ hybridization techniques using biotin- and 35S-labeled human papillomavirus (HPV) DNA probes.

Authors:  S Syrjänen; P Partanen; R Mäntyjärvi; K Syrjänen
Journal:  J Virol Methods       Date:  1988 Mar-Apr       Impact factor: 2.014

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  13 in total

1.  Novel bright field molecular morphology methods for detection of HER2 gene amplification.

Authors:  Raymond Tubbs; James Pettay; David Hicks; Marek Skacel; Richard Powell; Tom Grogan; James Hainfeld
Journal:  J Mol Histol       Date:  2004-08       Impact factor: 2.611

2.  In situ localisation of Yersinia enterocolitica by catalysed reported deposition signal amplification.

Authors:  P T Odinot; J F Meis; J A Hoogkamp-Korstanje; W J Melchers
Journal:  J Clin Pathol       Date:  1998-06       Impact factor: 3.411

3.  The efficacy of in situ PCR, CARD and nanogold systems for gene detection.

Authors:  G J Nuovo
Journal:  Am J Pathol       Date:  1997-10       Impact factor: 4.307

4.  Single-molecule protein arrays enabled by scanning probe block copolymer lithography.

Authors:  Jinan Chai; Lu Shin Wong; Louise Giam; Chad A Mirkin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-21       Impact factor: 11.205

5.  Fixation conditions for DNA and RNA in situ hybridization: a reassessment of molecular morphology dogma.

Authors:  A Tbakhi; G Totos; C Hauser-Kronberger; J Pettay; D Baunoch; G W Hacker; R R Tubbs
Journal:  Am J Pathol       Date:  1998-01       Impact factor: 4.307

6.  From lateral flow devices to a novel nano-color microfluidic assay.

Authors:  Saied Assadollahi; Christiane Reininger; Roland Palkovits; Peter Pointl; Thomas Schalkhammer
Journal:  Sensors (Basel)       Date:  2009-07-31       Impact factor: 3.576

7.  Genotyping of phenotypically defined cells in neoplasia: enhanced immunoFISH via tyramide signal amplification (TSA) segregates immunophenotypically-defined cell populations for gated genotyping.

Authors:  Raymond R Tubbs; Kingshuk Das; James R Cook; James D Pettay; Patrick C Roche; Thomas Grogan
Journal:  J Mol Histol       Date:  2007-01-05       Impact factor: 3.156

Review 8.  Applications of gold nanoparticles in virus detection.

Authors:  Mohamed Shehata Draz; Hadi Shafiee
Journal:  Theranostics       Date:  2018-02-15       Impact factor: 11.556

Review 9.  Rapid diagnostics of coronavirus disease 2019 in early stages using nanobiosensors: Challenges and opportunities.

Authors:  Majid Sharifi; Anwarul Hasan; Setareh Haghighat; Akbar Taghizadeh; Farnoosh Attar; Samir Haj Bloukh; Zehra Edis; Mengzhou Xue; Suliman Khan; Mojtaba Falahati
Journal:  Talanta       Date:  2020-09-28       Impact factor: 6.057

10.  Development and comparison of cross-linking and non-crosslinking probe-gold nanoparticle hybridization assays for direct detection of unamplified bovine viral diarrhea virus-RNA.

Authors:  Zahra Heidari; Seyedeh Elham Rezatofighi; Saadat Rastegarzadeh
Journal:  BMC Biotechnol       Date:  2021-04-23       Impact factor: 2.563

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