Literature DB >> 9135982

Ribosomes and ribosomal RNA as chaperones for folding of proteins.

W Kudlicki1, A Coffman, G Kramer, B Hardesty.   

Abstract

BACKGROUND: Provocative recent reports indicate that the large subunits of either prokaryotic or eukaryotic ribosomes have the capacity to promote refolding of denatured enzymes.
RESULTS: Salt-washed Escherichia coli ribosomes are shown to promote refolding of denatured rhodanese. The ability of the ribosomes to carry out renaturation is a property of the 50S ribosomal subunit, specifically the 23S rRNA. Refolding and release of enzymatically active rhodanese leaves the ribosomes in an inactive state or conformation for subsequent rounds refolding. Inactive ribosomes can be activated by elongation factor G (EF-G) plus GTP or by cleavage of their 23S rRNA by alpha-sarcin. Activation by either mechanism is strongly inhibited by the EF-G.GDP.fusidic acid complex.
CONCLUSIONS: Large subunits of E. coli ribosomes, specifically 23S rRNA, have the capacity to mediate refolding of denatured rhodanese. Refolding activity is related to the state or conformation of ribosomes that is promoted by EF-G. Activation by either mechanism is strongly inhibited by the EF-G.GDP.fusidic acid complex.

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Year:  1997        PMID: 9135982     DOI: 10.1016/S1359-0278(97)00014-X

Source DB:  PubMed          Journal:  Fold Des        ISSN: 1359-0278


  28 in total

1.  Involvement of mitochondrial ribosomal proteins in ribosomal RNA-mediated protein folding.

Authors:  Anindita Das; Jaydip Ghosh; Arpita Bhattacharya; Dibyendu Samanta; Debasis Das; Chanchal Das Gupta
Journal:  J Biol Chem       Date:  2011-10-21       Impact factor: 5.157

2.  Differences in the path to exit the ribosome across the three domains of life.

Authors:  Khanh Dao Duc; Sanjit S Batra; Nicholas Bhattacharya; Jamie H D Cate; Yun S Song
Journal:  Nucleic Acids Res       Date:  2019-05-07       Impact factor: 16.971

3.  Protein folding by domain V of Escherichia coli 23S rRNA: specificity of RNA-protein interactions.

Authors:  Dibyendu Samanta; Debashis Mukhopadhyay; Saheli Chowdhury; Jaydip Ghosh; Saumen Pal; Arunima Basu; Arpita Bhattacharya; Anindita Das; Debasis Das; Chanchal DasGupta
Journal:  J Bacteriol       Date:  2008-02-29       Impact factor: 3.490

4.  In vivo newly translated polypeptides are sequestered in a protected folding environment.

Authors:  V Thulasiraman; C F Yang; J Frydman
Journal:  EMBO J       Date:  1999-01-04       Impact factor: 11.598

5.  Reactivation of denatured proteins by domain V of bacterial 23S rRNA.

Authors:  D Pal; S Chattopadhyay; S Chandra; D Sarkar; A Chakraborty; C Das Gupta
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  The folding competence of HIV-1 Tat mediated by interaction with TAR RNA.

Authors:  Jung Min Kim; Hee Sun Choi; Baik Lin Seong
Journal:  RNA Biol       Date:  2017-04-18       Impact factor: 4.652

7.  The path of the growing peptide chain through the 23S rRNA in the 50S ribosomal subunit; a comparative cross-linking study with three different peptide families.

Authors:  K M Choi; R Brimacombe
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

8.  M1 RNA is important for the in-cell solubility of its cognate C5 protein: Implications for RNA-mediated protein folding.

Authors:  Ahyun Son; Seong Il Choi; Gyoonhee Han; Baik L Seong
Journal:  RNA Biol       Date:  2015-10-30       Impact factor: 4.652

9.  The participation of 5S rRNA in the co-translational formation of a eukaryotic 5S ribonucleoprotein complex.

Authors:  E Lin; S W Lin; A Lin
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

10.  The antiprion compound 6-aminophenanthridine inhibits the protein folding activity of the ribosome by direct competition.

Authors:  Yanhong Pang; Sriram Kurella; Cécile Voisset; Dibyendu Samanta; Debapriya Banerjee; Ariane Schabe; Chanchal Das Gupta; Hervé Galons; Marc Blondel; Suparna Sanyal
Journal:  J Biol Chem       Date:  2013-05-14       Impact factor: 5.157

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