Literature DB >> 9129839

Molecular resolution imaging of macromolecular crystals by atomic force microscopy.

A J Malkin, T A Land, J J DeYoreo, A P Barba, J Konnert, A McPherson.   

Abstract

Atomic force microscopy (AFM) images at the molecular level have been obtained for a number of different protein and virus crystals. They can be utilized in some special cases to obtain information useful to crystal structure analyses by x-ray diffraction. In particular, questions of space group enantiomer, the packing of molecules within a unit cell, the number of molecules per asymmetric unit, and the dispositions of multiple molecules within the asymmetric unit may be resolved. In addition, because of the increasing sensitivity and resolution of the AFM technique, some molecular features of very large asymmetric units may be within reach. We describe here high-resolution studies, using AFM, to visualize individual molecules and viruses in their crystal lattices. These investigations included fungal lipase, lysozyme, thaumatin, canavalin, and satellite tobacco mosaic virus (STMV).

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Year:  1997        PMID: 9129839      PMCID: PMC1184431          DOI: 10.1016/S0006-3495(97)78880-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  14 in total

1.  Investigation of virus crystal growth mechanisms by in situ atomic force microscopy.

Authors: 
Journal:  Phys Rev Lett       Date:  1995-10-02       Impact factor: 9.161

2.  Atomic force microscopy of insulin single crystals: direct visualization of molecules and crystal growth.

Authors:  C M Yip; M D Ward
Journal:  Biophys J       Date:  1996-08       Impact factor: 4.033

3.  A brief description of I.C.E.: the integrated crystallographic environment.

Authors:  S Hardt; B Wang; M F Schmid
Journal:  J Struct Biol       Date:  1996 Jan-Feb       Impact factor: 2.867

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Preliminary analysis of crystals of satellite tobacco mosaic virus.

Authors:  S Koszelak; J A Dodds; A McPherson
Journal:  J Mol Biol       Date:  1989-09-20       Impact factor: 5.469

6.  The crystal and molecular structure of the Rhizomucor miehei triacylglyceride lipase at 1.9 A resolution.

Authors:  Z S Derewenda; U Derewenda; G G Dodson
Journal:  J Mol Biol       Date:  1992-10-05       Impact factor: 5.469

7.  Cloning, expression, and crystallization of jack bean (Canavalia ensiformis) canavalin.

Authors:  J D Ng; T P Ko; A McPherson
Journal:  Plant Physiol       Date:  1993-03       Impact factor: 8.340

8.  The three-dimensional structure of canavalin from jack bean (Canavalia ensiformis).

Authors:  T P Ko; J D Ng; A McPherson
Journal:  Plant Physiol       Date:  1993-03       Impact factor: 8.340

9.  Mechanisms of growth for protein and virus crystals.

Authors:  A J Malkin; T A Land; J J DeYoreo; A McPherson
Journal:  Nat Struct Biol       Date:  1995-11

10.  Three-dimensional structure of satellite tobacco mosaic virus at 2.9 A resolution.

Authors:  S B Larson; S Koszelak; J Day; A Greenwood; J A Dodds; A McPherson
Journal:  J Mol Biol       Date:  1993-05-20       Impact factor: 5.469

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  10 in total

1.  From images to interactions: high-resolution phase imaging in tapping-mode atomic force microscopy.

Authors:  M Stark; C Möller; D J Müller; R Guckenberger
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

2.  Biophysical studies on the RNA cores of satellite tobacco mosaic virus.

Authors:  J Day; Y G Kuznetsov; S B Larson; A Greenwood; A McPherson
Journal:  Biophys J       Date:  2001-05       Impact factor: 4.033

3.  Imaging cell wall architecture in single Zinnia elegans tracheary elements.

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Journal:  Plant Physiol       Date:  2010-06-30       Impact factor: 8.340

4.  Mechanisms, kinetics, impurities and defects: consequences in macromolecular crystallization.

Authors:  Alexander McPherson; Yurii G Kuznetsov
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-03-29       Impact factor: 1.056

5.  Structural and morphological characterization of ultralente insulin crystals by atomic force microscopy: evidence of hydrophobically driven assembly.

Authors:  C M Yip; M R DeFelippis; B H Frank; M L Brader; M D Ward
Journal:  Biophys J       Date:  1998-09       Impact factor: 4.033

6.  Atomic force microscopy investigation of fibroblasts infected with wild-type and mutant murine leukemia virus (MuLV).

Authors:  Yurii G Kuznetsov; Shoibal Datta; Natantara H Kothari; Aaron Greenwood; Hung Fan; Alexander McPherson
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

7.  Spore coat architecture of Clostridium novyi NT spores.

Authors:  Marco Plomp; J Michael McCaffery; Ian Cheong; Xin Huang; Chetan Bettegowda; Kenneth W Kinzler; Shibin Zhou; Bert Vogelstein; Alexander J Malkin
Journal:  J Bacteriol       Date:  2007-06-22       Impact factor: 3.490

8.  A combined approach to characterize ligand-induced solid-solid phase transitions in biomacromolecular crystals.

Authors:  Saminathan Ramakrishnan; Jason R Stagno; Valentin Magidson; William F Heinz; Yun-Xing Wang
Journal:  J Appl Crystallogr       Date:  2021-05-09       Impact factor: 3.304

9.  Architecture and assembly of the Bacillus subtilis spore coat.

Authors:  Marco Plomp; Alicia Monroe Carroll; Peter Setlow; Alexander J Malkin
Journal:  PLoS One       Date:  2014-09-26       Impact factor: 3.240

10.  Applications of the second virial coefficient: protein crystallization and solubility.

Authors:  William W Wilson; Lawrence J Delucas
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-04-30       Impact factor: 1.056

  10 in total

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