Literature DB >> 9128718

The structure, function and application of the hammerhead ribozyme.

K R Birikh1, P A Heaton, F Eckstein.   

Abstract

The hammerhead ribozyme is one of the smallest ribozymes known and catalyses the site-specific hydrolysis of a phosphodiester bond. This small ribozyme is of interest for two reasons. It offers a convenient system to study the structure/function relationship of a nucleotide sequence, and is a potential vehicle for the inhibition of gene expression. The first part of the review summarizes the sequence requirements of the hammerhead, its three-dimensional structure and the proposed mechanism, in addition to ribozyme specificity and turnover. The second part of the review focuses on the in vivo application of the ribozyme. The processes involved in designing ribozymes for efficient cleavage in vivo are described, together with possible delivery strategies.

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Year:  1997        PMID: 9128718     DOI: 10.1111/j.1432-1033.1997.t01-3-00001.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  68 in total

Review 1.  Recent advances in the elucidation of the mechanisms of action of ribozymes.

Authors:  Y Takagi; M Warashina; W J Stec; K Yoshinari; K Taira
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

2.  Hybrid-hybrid matrix structural refinement of a DNA three-way junction from 3D NOESY-NOESY.

Authors:  V Thiviyanathan; B A Luxon; N B Leontis; N Illangasekare; D G Donne; D G Gorenstein
Journal:  J Biomol NMR       Date:  1999-07       Impact factor: 2.835

3.  Inhibition of luciferase expression by synthetic hammerhead ribozymes and their cellular uptake.

Authors:  B Bramlage; S Alefelder; P Marschall; F Eckstein
Journal:  Nucleic Acids Res       Date:  1999-08-01       Impact factor: 16.971

4.  Poliovirus requires a precise 5' end for efficient positive-strand RNA synthesis.

Authors:  J Herold; R Andino
Journal:  J Virol       Date:  2000-07       Impact factor: 5.103

Review 5.  Modification and repression of genes expressed in the mammary gland using gene targeting and other technologies.

Authors:  J L Vilotte; P L'Huillier; J C Mercier
Journal:  J Mammary Gland Biol Neoplasia       Date:  1998-07       Impact factor: 2.673

6.  A novel RNA-binding protein from Triturus carnifex identified by RNA-ligand screening with the newt hammerhead ribozyme.

Authors:  M A Denti; A E Martínez de Alba; R Sägesser; M Tsagris; M Tabler
Journal:  Nucleic Acids Res       Date:  2000-03-01       Impact factor: 16.971

7.  Ribozyme-mediated inhibition of caspase-3 protects cerebellar granule cells from apoptosis induced by serum-potassium deprivation.

Authors:  B A Eldadah; R F Ren; A I Faden
Journal:  J Neurosci       Date:  2000-01-01       Impact factor: 6.167

8.  HIV-1 LTR as a target for synthetic ribozyme-mediated inhibition of gene expression: site selection and inhibition in cell culture.

Authors:  B Bramlage; E Luzi; F Eckstein
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

9.  Assessment of ribozyme cleavage efficiency using reverse transcriptase real-time PCR.

Authors:  D Klein; M Denis; C Ricordi; R L Pastori
Journal:  Mol Biotechnol       Date:  2000-03       Impact factor: 2.695

10.  Distribution of hammerhead and hammerhead-like RNA motifs through the GenBank.

Authors:  G Ferbeyre; V Bourdeau; M Pageau; P Miramontes; R Cedergren
Journal:  Genome Res       Date:  2000-07       Impact factor: 9.043

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