Literature DB >> 911790

Interpretation of monovalent and divalent cation effects on the lac repressor-operator interaction.

M T Record, P L deHaseth, T M Lohman.   

Abstract

We have investigated the effects of mixed Na+: Mg2+ ionic solutions on the stability of the nonspecific lac repressor-DNA complex. The effects of Mg2+ are simply interpreted in terms of its role as a competitor (with repressor) for DNA sites. From these studies, the binding constant of the Mg-DNA complex can be determined as a function of the concentration of Na+. We have used this information to interpret the data of Riggs and collaborators (Riggs, A.D., et al. (1970), J. Mol. Biol. 48, 67-83; 53, 401-417) on the ion dependence of the repressor-operator interaction. We find that there are approximately 70% as many ionic interactions in the repressor-operator complex as in the nonspecific complex. Our best estimate is that 8 +/- 1 ion pairs are formed. We calculate that the release of counterions in the formation of the specific complex contributes approximately 40% of the favorable free energy change in the association reaction under in vivo ionic conditions. Implications of these findings for the control of the lac operon and for the molecular relationship between the specific and nonspecific complexes are considered.

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Year:  1977        PMID: 911790     DOI: 10.1021/bi00641a005

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  59 in total

1.  Quantitative characterization of the interaction between purified human estrogen receptor alpha and DNA using fluorescence anisotropy.

Authors:  M Boyer; N Poujol; E Margeat; C A Royer
Journal:  Nucleic Acids Res       Date:  2000-07-01       Impact factor: 16.971

2.  Interaction of RNA polymerase with forked DNA: evidence for two kinetically significant intermediates on the pathway to the final complex.

Authors:  Laura Tsujikawa; Oleg V Tsodikov; Pieter L deHaseth
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-12       Impact factor: 11.205

3.  Physical constraints and functional characteristics of transcription factor-DNA interaction.

Authors:  Ulrich Gerland; J David Moroz; Terence Hwa
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-06       Impact factor: 11.205

4.  Solvation change and ion release during aminoacylation by aminoacyl-tRNA synthetases.

Authors:  Rajat Banerjee; Amit Kumar Mandal; Rajesh Saha; Soumi Guha; Soma Samaddar; Anusree Bhattacharyya; Siddhartha Roy
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

5.  Ionic interactions between PRNA and P protein in Bacillus subtilis RNase P characterized using a magnetocapture-based assay.

Authors:  Jeremy J Day-Storms; S Niranjanakumari; Carol A Fierke
Journal:  RNA       Date:  2004-08-30       Impact factor: 4.942

6.  Sequence discrimination by DNA-binding domain of ETS family transcription factor PU.1 is linked to specific hydration of protein-DNA interface.

Authors:  Gregory M K Poon
Journal:  J Biol Chem       Date:  2012-04-02       Impact factor: 5.157

7.  Cation binding linked to a sequence-specific CAP-DNA interaction.

Authors:  Douglas F Stickle; Michael G Fried
Journal:  Biophys Chem       Date:  2006-06-19       Impact factor: 2.352

8.  The electrostatic character of the ribosomal surface enables extraordinarily rapid target location by ribotoxins.

Authors:  Alexei V Korennykh; Joseph A Piccirilli; Carl C Correll
Journal:  Nat Struct Mol Biol       Date:  2006-04-09       Impact factor: 15.369

9.  Communication between noncontacting macromolecules.

Authors:  J Völker; H H Klump; K J Breslauer
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

10.  The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments.

Authors:  F K Winkler; D W Banner; C Oefner; D Tsernoglou; R S Brown; S P Heathman; R K Bryan; P D Martin; K Petratos; K S Wilson
Journal:  EMBO J       Date:  1993-05       Impact factor: 11.598

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