Literature DB >> 9108065

Gypsy retrotransposon as a tool for the in vivo analysis of the regulatory region of the optomotor-blind gene in Drosophila.

S F Tsai1, C C Jang, G G Prikhod'ko, D A Bessarab, C Y Tang, G O Pflugfelder, Y H Sun.   

Abstract

We report here a method for the in vivo dissection of the regulatory region of a gene in the Drosophila genome. Our system includes (i) the reporter genes lacZ and white to detect transcriptional enhancer and silencer activities in a target gene, (ii) an efficient way to induce integration of gypsy elements in the genome, and (iii) unidirectional blocking of regulatory activities by the gypsy element, which is dependent on the su(Hw) protein. The optomotor-blind (omb) gene was analyzed. In the omb(P1) line, a P[lacW] construct is inserted about 1.4 kb upstream of the omb transcription start site. The lacZ reporter gene within P[lacW] exhibits the same expression pattern as omb. The white reporter gene is expressed in a "bipolar" pattern. We induced high frequency gypsy mobilization in omb(P1) and identified two lines (D11 and D13-1) with altered eye pigmentation pattern, which is dependent on su(Hw) activity. A gypsy element was found inserted in the first intron of omb in D13-1 and in P[lacW] in D11. These results indicate that it is the blocking of regulatory activities by gypsy that caused the changes in the white reporter gene expression. The effect of these gypsy insertions on the expression patterns allowed us to predict several aspects of the organization of the regulatory elements in the omb locus.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9108065      PMCID: PMC20528          DOI: 10.1073/pnas.94.8.3837

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector.

Authors:  E Bier; H Vaessin; S Shepherd; K Lee; K McCall; S Barbel; L Ackerman; R Carretto; T Uemura; E Grell
Journal:  Genes Dev       Date:  1989-09       Impact factor: 11.361

2.  Sequences of the gypsy transposon of Drosophila necessary for its effects on adjacent genes.

Authors:  M Peifer; W Bender
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

3.  Mutant gene phenotypes mediated by a Drosophila melanogaster retrotransposon require sequences homologous to mammalian enhancers.

Authors:  P K Geyer; M M Green; V G Corces
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

4.  The 87A7 chromomere. Identification of novel chromatin structures flanking the heat shock locus that may define the boundaries of higher order domains.

Authors:  A Udvardy; E Maine; P Schedl
Journal:  J Mol Biol       Date:  1985-09-20       Impact factor: 5.469

5.  The isolation of structural genes from libraries of eucaryotic DNA.

Authors:  T Maniatis; R C Hardison; E Lacy; J Lauer; C O'Connell; D Quon; G K Sim; A Efstratiadis
Journal:  Cell       Date:  1978-10       Impact factor: 41.582

6.  The Drosophila melanogaster gypsy transposable element encodes putative gene products homologous to retroviral proteins.

Authors:  R L Marlor; S M Parkhurst; V G Corces
Journal:  Mol Cell Biol       Date:  1986-04       Impact factor: 4.272

7.  Genetic and molecular characterization of the optomotor-blind gene locus in Drosophila melanogaster.

Authors:  G O Pflugfelder; H Schwarz; H Roth; B Poeck; A Sigl; S Kerscher; B Jonschker; W L Pak; M Heisenberg
Journal:  Genetics       Date:  1990-09       Impact factor: 4.562

8.  DNA position-specific repression of transcription by a Drosophila zinc finger protein.

Authors:  P K Geyer; V G Corces
Journal:  Genes Dev       Date:  1992-10       Impact factor: 11.361

9.  The Drosophila melanogaster suppressor of Hairy-wing protein binds to specific sequences of the gypsy retrotransposon.

Authors:  C Spana; D A Harrison; V G Corces
Journal:  Genes Dev       Date:  1988-11       Impact factor: 11.361

10.  Control elements of the Drosophila segmentation gene fushi tarazu.

Authors:  Y Hiromi; A Kuroiwa; W J Gehring
Journal:  Cell       Date:  1985-12       Impact factor: 41.582

View more
  7 in total

1.  SUMO conjugation attenuates the activity of the gypsy chromatin insulator.

Authors:  Maya Capelson; Victor G Corces
Journal:  EMBO J       Date:  2006-04-20       Impact factor: 11.598

2.  The lawc gene is a new member of the trithorax-group that affects the function of the gypsy insulator of Drosophila.

Authors:  I D Zorin; T I Gerasimova; V G Corces
Journal:  Genetics       Date:  1999-07       Impact factor: 4.562

3.  The RNA-binding protein Rumpelstiltskin antagonizes gypsy chromatin insulator function in a tissue-specific manner.

Authors:  Matthew R King; Leah H Matzat; Ryan K Dale; Su Jun Lim; Elissa P Lei
Journal:  J Cell Sci       Date:  2014-04-04       Impact factor: 5.285

4.  Enhancer trap infidelity in Drosophila optomotor-blind.

Authors:  Lisa R Mayer; Sören Diegelmann; Yasmin Abassi; Fred Eichinger; Gert O Pflugfelder
Journal:  Fly (Austin)       Date:  2013-03-21       Impact factor: 2.160

5.  The chromosomal association/dissociation of the chromatin insulator protein Cp190 of Drosophila melanogaster is mediated by the BTB/POZ domain and two acidic regions.

Authors:  Daniel Oliver; Brian Sheehan; Heather South; Omar Akbari; Chi-Yun Pai
Journal:  BMC Cell Biol       Date:  2010-12-31       Impact factor: 4.241

6.  A region-specific neurogenesis mode requires migratory progenitors in the Drosophila visual system.

Authors:  Holger Apitz; Iris Salecker
Journal:  Nat Neurosci       Date:  2014-12-15       Impact factor: 24.884

7.  Spatio-temporal relays control layer identity of direction-selective neuron subtypes in Drosophila.

Authors:  Holger Apitz; Iris Salecker
Journal:  Nat Commun       Date:  2018-06-12       Impact factor: 14.919

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.