Literature DB >> 9098897

Pressure-dependent ionization of Tyr 9 in glutathione S-transferase A1-1: contribution of the C-terminal helix to a "soft" active site.

W M Atkins1, E C Dietze, C Ibarra.   

Abstract

The glutathione S-transferase (GST) isozyme A1-1 contains at its active site a catalytic tyrosine, Tyr9, which hydrogen bonds to, and stabilizes, the thiolate form of glutathione, GS-. In the substrate-free GST A1-1, the Tyr 9 has an unusually low pKa, approximately 8.2, for which the ionization to tyrosinate is monitored conveniently by UV and fluorescence spectroscopy in the tryptophan-free mutant, W21F. In addition, a short alpha-helix, residues 208-222, provides part of the GSH and hydrophobic ligand binding sites, and the helix becomes "disordered" in the absence of ligands. Here, hydrostatic pressure has been used to probe the conformational dynamics of the C-terminal helix, which are apparently linked to Tyr 9 ionization. The extent of ionization of Tyr 9 at pH 7.6 is increased dramatically at low pressures (p1/2 = 0.52 kbar), based on fluorescence titration of Tyr 9. The mutant protein W21F:Y9F exhibits no changes in tyrosine fluorescence up to 1.2 kbar; pressure specifically ionizes Tyr 9. The volume change, delta V, for the pressure-dependent ionization of Tyr 9 at pH 7.6, 19 degrees C, was -33 +/- 3 mL/mol. In contrast, N-acetyl tyrosine exhibits a delta V for deprotonation of -11 +/- 1 mL/mol, beginning from the same extent of initial ionization, pH 9.5. The pressure-dependent ionization is completely reversible for both Tyr 9 and N-acetyl tyrosine. Addition of S-methyl GSH converted the "soft" active site to a noncompressible site that exhibited negligible pressure-dependent ionization of Tyr 9 below 0.8 kbar. In addition, Phe 220 forms part of an "aromatic cluster" with Tyr 9 and Phe 10, and interactions among these residues were hypothesized to control the order of the C-terminal helix. The amino acid substitutions F220Y, F2201, and F220L afford proteins that undergo pressure-dependent ionization of Tyr 9 with delta V values of 31 +/- 2 mL/mol, 43 +/- 3 mL/mol, and 29 +/- 2 mL/mol, respectively. The p1/2 values for Tyr 9 ionization were 0.61 kbar, 0.41 kbar, and 0.46 kbar for F220Y, F220I, and F220L, respectively. Together, the results suggest that the C-terminal helix is conformationally heterogeneous in the absence of ligands. The conformations differ little in free energy, but they are significantly different in volume, and mutations at Phe 220 control the conformational distribution.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9098897      PMCID: PMC2144754          DOI: 10.1002/pro.5560060414

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  25 in total

1.  Effect of the tyrosine 96 hydrogen bond on the inactivation of cytochrome P-450cam induced by hydrostatic pressure.

Authors:  C Di Primo; G Hui Bon Hoa; P Douzou; S Sligar
Journal:  Eur J Biochem       Date:  1990-10-24

2.  Volumetric properties of proteins and their analogs in diluted water solutions. 1. Partial volumes of amino acids at 15-55 degrees C.

Authors:  D P Kharakoz
Journal:  Biophys Chem       Date:  1989-10       Impact factor: 2.352

3.  Dissociation and unfolding of Pi-class glutathione transferase. Evidence for a monomeric inactive intermediate.

Authors:  A Aceto; A M Caccuri; P Sacchetta; T Bucciarelli; B Dragani; N Rosato; G Federici; C Di Ilio
Journal:  Biochem J       Date:  1992-07-01       Impact factor: 3.857

4.  Participation of the phenolic hydroxyl group of Tyr-8 in the catalytic mechanism of human glutathione transferase P1-1.

Authors:  R H Kolm; G E Sroga; B Mannervik
Journal:  Biochem J       Date:  1992-07-15       Impact factor: 3.857

5.  Packing at the protein-water interface.

Authors:  M Gerstein; C Chothia
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-17       Impact factor: 11.205

6.  Observation of a substituent effect on the stereoselectivity of glutathione S-transferase toward para-substituted 4-phenyl-3-buten-2-ones.

Authors:  Y Kubo; R N Armstrong
Journal:  Chem Res Toxicol       Date:  1989 May-Jun       Impact factor: 3.739

Review 7.  The theory of pressure effects on enzymes.

Authors:  E Morild
Journal:  Adv Protein Chem       Date:  1981

8.  Mutation of an evolutionarily conserved tyrosine residue in the active site of a human class Alpha glutathione transferase.

Authors:  G Stenberg; P G Board; B Mannervik
Journal:  FEBS Lett       Date:  1991-11-18       Impact factor: 4.124

9.  Structure determination and refinement of human alpha class glutathione transferase A1-1, and a comparison with the Mu and Pi class enzymes.

Authors:  I Sinning; G J Kleywegt; S W Cowan; P Reinemer; H W Dirr; R Huber; G L Gilliland; R N Armstrong; X Ji; P G Board
Journal:  J Mol Biol       Date:  1993-07-05       Impact factor: 5.469

10.  Site-directed mutagenesis of glutathione S-transferase YaYa: nonessential role of histidine in catalysis.

Authors:  R W Wang; D J Newton; C B Pickett; A Y Lu
Journal:  Arch Biochem Biophys       Date:  1991-05-01       Impact factor: 4.013

View more
  5 in total

1.  An approach to optimizing the active site in a glutathione transferase by evolution in vitro.

Authors:  L O Hansson; M Widersten; B Mannervik
Journal:  Biochem J       Date:  1999-11-15       Impact factor: 3.857

2.  The C-terminus of glutathione S-transferase A1-1 is required for entropically-driven ligand binding.

Authors:  B S Nieslanik; C Ibarra; W M Atkins
Journal:  Biochemistry       Date:  2001-03-27       Impact factor: 3.162

3.  Contribution of aromatic-aromatic interactions to the anomalous pK(a) of tyrosine-9 and the C-terminal dynamics of glutathione S-transferase A1-1.

Authors:  C Ibarra; B S Nieslanik; W M Atkins
Journal:  Biochemistry       Date:  2001-09-04       Impact factor: 3.162

4.  Noncovalent associations of glutathione S-transferase and ligands: a study using electrospray quadrupole/time-of-flight mass spectrometry.

Authors:  M Ishigai; J I Langridge; R S Bordoli; S J Gaskell
Journal:  J Am Soc Mass Spectrom       Date:  2000-07       Impact factor: 3.109

5.  The anomalous pKa of Tyr-9 in glutathione S-transferase A1-1 catalyzes product release.

Authors:  Catherine A Ibarra; Pramit Chowdhury; Jacob W Petrich; William M Atkins
Journal:  J Biol Chem       Date:  2003-03-13       Impact factor: 5.157

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.