Literature DB >> 9097454

Detection of Methylobacterium species by 16S rRNA gene-targeted PCR.

T Nishio1, T Yoshikura, H Itoh.   

Abstract

We designed PCR primers for specific amplification of the 16S rRNA genes of seven species of the genus Methylobacterium. All of the pairwise species tested were successfully differentiated by PCR detection with a combination of five primer sets, with the exception of M. extorquens and M. rhodesianum. These primers did not cross-react with closely related bacteria in the alpha subclass tested.

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Year:  1997        PMID： 9097454      PMCID： PMC168451          DOI： 10.1128/aem.63.4.1594-1597.1997

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  17 in total

1.  Compilation of small ribosomal subunit RNA sequences.

Authors:  J M Neefs; Y Van de Peer; L Hendriks; R De Wachter
Journal:  Nucleic Acids Res       Date:  1990-04-25       Impact factor: 16.971

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Authors:  G J Olsen; D J Lane; S J Giovannoni; N R Pace; D A Stahl
Journal:  Annu Rev Microbiol       Date:  1986       Impact factor: 15.500

4.  Use of 16S rRNA analysis to investigate phylogeny of methylotrophic bacteria.

Authors:  B J Bratina; G A Brusseau; R S Hanson
Journal:  Int J Syst Bacteriol       Date:  1992-10

5.  Predicting DNA duplex stability from the base sequence.

Authors:  K J Breslauer; R Frank; H Blöcker; L A Marky
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

6.  Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.

Authors:  J Brosius; M L Palmer; P J Kennedy; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

7.  16S ribosomal RNA sequence analysis for determination of phylogenetic relationship among methylotrophs.

Authors:  K Tsuji; H C Tsien; R S Hanson; S R DePalma; R Scholtz; S LaRoche
Journal:  J Gen Microbiol       Date:  1990-01

8.  Detection of Pseudomonas mesophilica as a source of nosocomial infections in a bone marrow transplant unit.

Authors:  M J Gilchrist; J A Kraft; J G Hammond; B L Connelly; M G Myers
Journal:  J Clin Microbiol       Date:  1986-06       Impact factor: 5.948

9.  Pseudomonas mesophilica and an unnamed taxon, clinical isolates of pink-pigmented oxidative bacteria.

Authors:  G L Gilardi; Y C Faur
Journal:  J Clin Microbiol       Date:  1984-10       Impact factor: 5.948

10.  Improved free-energy parameters for predictions of RNA duplex stability.

Authors:  S M Freier; R Kierzek; J A Jaeger; N Sugimoto; M H Caruthers; T Neilson; D H Turner
Journal:  Proc Natl Acad Sci U S A       Date:  1986-12       Impact factor: 11.205
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  11 in total

1.  Discordant carbapenem susceptibility in Methylobacterium species and its application as a method for phenotypic identification.

Authors:  G J Zaharatos; A Dascal; M A Miller
Journal:  J Clin Microbiol       Date:  2001-05       Impact factor: 5.948

2.  Cultivation-independent characterization of methylobacterium populations in the plant phyllosphere by automated ribosomal intergenic spacer analysis.

Authors:  Claudia Knief; Lisa Frances; Franck Cantet; Julia A Vorholt
Journal:  Appl Environ Microbiol       Date:  2008-02-08       Impact factor: 4.792

3.  Culture-independent assessment of Rhizobiales-related alphaproteobacteria and the diversity of Methylobacterium in the rhizosphere and rhizoplane of transgenic eucalyptus.

Authors:  Fernando Dini Andreote; Raphael Tozelli Carneiro; Joana Falcão Salles; Joelma Marcon; Carlos Alberto Labate; João Lúcio Azevedo; Welington Luiz Araújo
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4.  Biodegradation of nitro-substituted explosives 2,4,6-trinitrotoluene, hexahydro-1,3,5-trinitro-1,3,5-triazine, and octahydro-1,3,5,7-tetranitro-1,3,5-tetrazocine by a phytosymbiotic Methylobacterium sp. associated with poplar tissues (Populus deltoides x nigra DN34).

Authors:  Benoit Van Aken; Jong Moon Yoon; Jerald L Schnoor
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

5.  Methylotrophic bacteria on the surfaces of field-grown sunflower plants: a biogeographic perspective.

Authors:  S Schauer; U Kutschera
Journal:  Theory Biosci       Date:  2008-01-11       Impact factor: 1.919

6.  The diversity of endophytic methylotrophic bacteria in an oil-contaminated and an oil-free mangrove ecosystem and their tolerance to heavy metals.

Authors:  Manuella Nobrega Dourado; Anderson Ferreira; Welington Luiz Araújo; João Lúcio Azevedo; Paulo Teixeira Lacava
Journal:  Biotechnol Res Int       Date:  2012-03-07

7.  Cluster formation in liverwort-associated methylobacteria and its implications.

Authors:  U Kutschera; J Thomas; M Hornschuh
Journal:  Naturwissenschaften       Date:  2007-04-04

8.  Rhizobiales as functional and endosymbiontic members in the lichen symbiosis of Lobaria pulmonaria L.

Authors:  Armin Erlacher; Tomislav Cernava; Massimiliano Cardinale; Jung Soh; Christoph W Sensen; Martin Grube; Gabriele Berg
Journal:  Front Microbiol       Date:  2015-02-10       Impact factor: 5.640

9.  First report of Methylobacterium radiotolerans bacteraemia identified by MALDI-TOF mass spectrometry.

Authors:  M Cordovana; A Deni; M Kostrzewa; M Abdalla; S Ambretti
Journal:  New Microbes New Infect       Date:  2019-04-10

10.  Microbial dysbiosis is associated with human breast cancer.

Authors:  Caiyun Xuan; Jaime M Shamonki; Alice Chung; Maggie L Dinome; Maureen Chung; Peter A Sieling; Delphine J Lee
Journal:  PLoS One       Date:  2014-01-08       Impact factor: 3.240
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