Literature DB >> 9087913

Conformational changes in the GroEL oligomer during the functional cycle.

O Llorca1, S Marco, J L Carrascosa, J M Valpuesta.   

Abstract

The conformational changes that the GroEL oligomer undergoes upon nucleotide and cochaperonin GroES binding have been studied using electron microscopy and image processing techniques. Average side views of the three allosteric states (TT, TR, and RR, which correspond to none, one, or both of the two heptameric rings of the GroEL oligomer occupied by nucleotide, respectively) of GroEL and GroEL-GroES complexes for ADP, ATP, and two nonhydrolyzable analogs (AMP-PNP and ATP gamma S) have been obtained at 20-25 A resolution. Both AMP-PNP and ATP induce similar conformational shifts in the apical domains of GroEL. At the TR state, only one of the GroEL rings shows an upward and outward movement of the apical domains ("open state"). At the RR state for AMP-PNP and ATP, both GroEL rings undergo conformational changes, albeit of different magnitude, giving rise to a structurally asymmetric particle (one ring in the "open" state, while the other is in an "intermediate" state). These changes are also observed when GroEL is incubated with ADP and Pi, but not with ADP, which suggests that upon ATP binding, GroEL undergoes a conformational change that is partly maintained after ATP hydrolysis and as long as ADP and Pi are bound to the GroEL ring. The conformational changes undergone by GroEL are discussed within the framework of a proposed GroEL cycle mechanism.

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Year:  1997        PMID: 9087913     DOI: 10.1006/jsbi.1996.3832

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  9 in total

1.  The unfolding action of GroEL on a protein substrate.

Authors:  Arjan van der Vaart; Jianpeng Ma; Martin Karplus
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

2.  Ionic interactions at both inter-ring contact sites of GroEL are involved in transmission of the allosteric signal: a time-resolved infrared difference study.

Authors:  Begoña Sot; Fritzthof von Germar; Werner Mäntele; Jose María Valpuesta; Stefka G Taneva; Arturo Muga
Journal:  Protein Sci       Date:  2005-08-04       Impact factor: 6.725

3.  Probing the sequence of conformationally induced polarity changes in the molecular chaperonin GroEL with fluorescence spectroscopy.

Authors:  So Yeon Kim; Alexander N Semyonov; Robert J Twieg; Arthur L Horwich; Judith Frydman; W E Moerner
Journal:  J Phys Chem B       Date:  2005-12-29       Impact factor: 2.991

4.  Asymmetry of the GroEL-GroES complex under physiological conditions as revealed by small-angle x-ray scattering.

Authors:  Tomonao Inobe; Kazunobu Takahashi; Kosuke Maki; Sawako Enoki; Kiyoto Kamagata; Akio Kadooka; Munehito Arai; Kunihiro Kuwajima
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

5.  The allosteric mechanism of the chaperonin GroEL: a dynamic analysis.

Authors:  J Ma; M Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-21       Impact factor: 11.205

6.  Thermal inactivation and chaperonin-mediated renaturation of mitochondrial aspartate aminotransferase.

Authors:  J M Lawton; S Doonan
Journal:  Biochem J       Date:  1998-08-15       Impact factor: 3.857

Review 7.  Structural frameworks for considering microbial protein- and nucleic acid-dependent motor ATPases.

Authors:  Nathan D Thomsen; James M Berger
Journal:  Mol Microbiol       Date:  2008-07-21       Impact factor: 3.501

8.  Functional Subunits of Eukaryotic Chaperonin CCT/TRiC in Protein Folding.

Authors:  M Anaul Kabir; Wasim Uddin; Aswathy Narayanan; Praveen Kumar Reddy; M Aman Jairajpuri; Fred Sherman; Zulfiqar Ahmad
Journal:  J Amino Acids       Date:  2011-07-02

Review 9.  Chaperonin GroEL uses asymmetric and symmetric reaction cycles in response to the concentration of non-native substrate proteins.

Authors:  Ryo Iizuka; Takashi Funatsu
Journal:  Biophys Physicobiol       Date:  2016-04-22
  9 in total

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