Literature DB >> 9084787

Divergence of HIV-1 quasispecies in an epidemiologic cluster.

R S Diaz1, L Zhang, M P Busch, J W Mosley, A Mayer.   

Abstract

BACKGROUND: During treatment with blood components prepared from an HIV-infected donation, two recipients became infected in 1985. One recipient infected her sexual partner.
OBJECTIVE: To evaluate the evolution of the originally-shared HIV-1 quasispecies in different human hosts over time, sequence data were obtained from serum from the actual donation sample of blood, and from plasma samples collected from the four members of the epidemiologic cluster over a period extending from 1986 to 1993.
METHODS: The V3 hypervariable region of env and the gag p17 gene were analysed. CD4 and CD8 counts, as well as HIV RNA burden data, were collected.
RESULTS: One patient died from AIDS during the study. This patient showed a greater degree of diversity in the V3 region, with a higher positive charge over time, than the other individuals. Phylogenetic analysis revealed that the V3 sequences from each of the four individuals occupied separate branches of a phylogenetic reconstruction (tree). Two distinct subgroups evolved in the donor, one with GPGR and the other with GSGR/GSGK at the tip of the V3 loop. This latter group was not detected in the other individuals. The sequences in the sexual partner were no more related to those in the infecting transfusion recipient than to sequences from the other members of the cluster, consistent with sexual transmission having occurred at a time shortly after the recipient was infected.
CONCLUSION: The shared HIV-1 quasispecies in this epidemiologic cluster diverged in an individual-specific manner.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9084787     DOI: 10.1097/00002030-199704000-00003

Source DB:  PubMed          Journal:  AIDS        ISSN: 0269-9370            Impact factor:   4.177


  11 in total

1.  A Guide to HIV-1 Reverse Transcriptase and Protease Sequencing for Drug Resistance Studies.

Authors:  Robert W Shafer; Kathryn Dupnik; Mark A Winters; Susan H Eshleman
Journal:  HIV Seq Compend       Date:  2001

2.  Genetic and stochastic influences on the interaction of human immunodeficiency virus type 1 and cytotoxic T lymphocytes in identical twins.

Authors:  Otto O Yang; Joseph Church; Christina M R Kitchen; Ryan Kilpatrick; Ayub Ali; Yongzhi Geng; M Scott Killian; Rachel Lubong Sabado; Hwee Ng; Jeffrey Suen; Yvonne Bryson; Beth D Jamieson; Paul Krogstad
Journal:  J Virol       Date:  2005-12       Impact factor: 5.103

3.  Pace of Coreceptor Tropism Switch in HIV-1-Infected Individuals after Recent Infection.

Authors:  Muhammad Shoaib Arif; James Hunter; Ana Rachel Léda; Jean Paulo Lopes Zukurov; Sadia Samer; Michelle Camargo; Juliana Galinskas; Esper Georges Kallás; Shirley Vasconcelos Komninakis; Luiz Mario Janini; Maria Cecilia Sucupira; Ricardo Sobhie Diaz
Journal:  J Virol       Date:  2017-09-12       Impact factor: 5.103

4.  Homogenous HIV-1 subtype B quasispecies in Brazilian men and women recently infected via heterosexual transmission.

Authors:  Nancy Lima Gouveia; Michelle Camargo; Marcos Montani Caseiro; Luiz Mario Ramos Janini; Maria Cecilia Araripe Sucupira; Ricardo Sobhie Diaz
Journal:  Virus Genes       Date:  2014-02-14       Impact factor: 2.332

5.  Regional spread of HIV-1 M subtype B in middle-aged patients by random env-C2V4 region sequencing.

Authors:  Martin Stürmer; Katrin Zimmermann; Carlos Fritzsche; Emil Reisinger; Gottfried Doelken; Annemarie Berger; Hans W Doerr; Josef Eberle; Lutz G Gürtler
Journal:  Med Microbiol Immunol       Date:  2010-03-09       Impact factor: 3.402

6.  Decreased HIV diversity after allogeneic stem cell transplantation of an HIV-1 infected patient: a case report.

Authors:  Christel Kamp; Timo Wolf; Ignacio G Bravo; Benjamin Kraus; Birgit Krause; Britta Neumann; Gudrun Winskowsky; Alexander Thielen; Albrecht Werner; Barbara S Schnierle
Journal:  Virol J       Date:  2010-03-08       Impact factor: 4.099

7.  Faster HIV-1 disease progression among Brazilian individuals recently infected with CXCR4-utilizing strains.

Authors:  Maria Cecilia Araripe Sucupira; Sabri Sanabani; Rodrigo M Cortes; Maria Teresa M Giret; Helena Tomiyama; Mariana M Sauer; Ester Cerdeira Sabino; Luiz Mario Janini; Esper Georges Kallas; Ricardo Sobhie Diaz
Journal:  PLoS One       Date:  2012-01-26       Impact factor: 3.240

8.  Relaxation of adaptive evolution during the HIV-1 infection owing to reduction of CD4+ T cell counts.

Authors:  Élcio Leal; Jorge Casseb; Michael Hendry; Michael P Busch; Ricardo Sobhie Diaz
Journal:  PLoS One       Date:  2012-06-29       Impact factor: 3.240

9.  Immunogenicity of personalized dendritic-cell therapy in HIV-1 infected individuals under suppressive antiretroviral treatment: interim analysis from a phase II clinical trial.

Authors:  Marcella Vassão de Almeida Baptista; Laís Teodoro da Silva; Sadia Samer; Telma Miyuki Oshiro; Iart Luca Shytaj; Leila B Giron; Nathalia Mantovani Pena; Nicolly Cruz; Gisele Cristina Gosuen; Paulo Roberto Abrão Ferreira; Edécio Cunha-Neto; Juliana Galinskas; Danilo Dias; Maria Cecilia Araripe Sucupira; Cesar de Almeida-Neto; Reinaldo Salomão; Alberto José da Silva Duarte; Luís Mário Janini; James R Hunter; Andrea Savarino; Maria Aparecida Juliano; Ricardo Sobhie Diaz
Journal:  AIDS Res Ther       Date:  2022-01-12       Impact factor: 2.250

10.  The genealogical population dynamics of HIV-1 in a large transmission chain: bridging within and among host evolutionary rates.

Authors:  Bram Vrancken; Andrew Rambaut; Marc A Suchard; Alexei Drummond; Guy Baele; Inge Derdelinckx; Eric Van Wijngaerden; Anne-Mieke Vandamme; Kristel Van Laethem; Philippe Lemey
Journal:  PLoS Comput Biol       Date:  2014-04-03       Impact factor: 4.475

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.