Literature DB >> 9068640

Genomic organization of the acidophilic chemolithoautotrophic bacterium Thiobacillus ferrooxidans ATCC 21834.

N Irazabal1, I Marín, R Amils.   

Abstract

The genomic organization of the acidophilic chemolithoautotrophic bacterium Thiobacillus ferrooxidans ATCC 21834 has been studied by pulsed-field gel electrophoresis (PFGE). Analysis of its intact DNA, as well as the restriction patterns obtained with several endonucleases, allowed the characterization of one circular chromosome of 2.9 Mb and one plasmid of 8.6 kb. The first complete and highly resolved physical map (86 restriction sites) of the chromosome of an acidophilic obligate chemolithoautotrophic bacterium has been constructed by using endonucleases PmeI, SwaI, XbaI, and SpeI. The rRNA and str operons have been located on the chromosomal physical map.

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Year:  1997        PMID： 9068640      PMCID： PMC178918          DOI： 10.1128/jb.179.6.1946-1950.1997

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  14 in total

1.  [Restriction analysis of Thiobacillus ferrooxidans DNA using pulsed field electrophoresis].

Authors:  T F Kondrat'eva; G I Karavaĭko
Journal:  Mol Gen Mikrobiol Virusol       Date:  1992 Mar-Apr

2.  Growth of Thiobacillus ferrooxidans on Formic Acid.

Authors:  J T Pronk; W M Meijer; W Hazeu; J P van Dijken; P Bos; J G Kuenen
Journal:  Appl Environ Microbiol       Date:  1991-07       Impact factor: 4.792

3.  Characterization of the 'unusual' mobility of large circular DNAs in pulsed field-gradient electrophoresis.

Authors:  S M Beverley
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

4.  High-resolution separation and accurate size determination in pulsed-field gel electrophoresis of DNA. 2. Effect of pulse time and electric field strength and implications for models of the separation process.

Authors:  M K Mathew; C L Smith; C R Cantor
Journal:  Biochemistry       Date:  1988-12-27       Impact factor: 3.162

5.  Separation of large DNA molecules by contour-clamped homogeneous electric fields.

Authors:  G Chu; D Vollrath; R W Davis
Journal:  Science       Date:  1986-12-19       Impact factor: 47.728

6.  Characterization of the two rRNA gene operons present in Thiobacillus ferrooxidans.

Authors:  O Salazar; M Takamiya; O Orellana
Journal:  FEBS Lett       Date:  1989-01-02       Impact factor: 4.124

7.  Halobacterial megaplasmids are negatively supercoiled.

Authors:  P López-García; J Antón; J P Abad; R Amils
Journal:  Mol Microbiol       Date:  1994-02       Impact factor: 3.501

8.  Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis.

Authors:  D C Schwartz; C R Cantor
Journal:  Cell       Date:  1984-05       Impact factor: 41.582

Review 9.  Molecular genetics of Thiobacillus ferrooxidans.

Authors:  D E Rawlings; T Kusano
Journal:  Microbiol Rev       Date:  1994-03

10.  Kinetics and energetics of reduced sulfur oxidation by chemostat cultures of Thiobacillus ferrooxidans.

Authors:  W Hazeu; W Bijleveld; J T Grotenhuis; E Kakes; J G Kuenen
Journal:  Antonie Van Leeuwenhoek       Date:  1986       Impact factor: 2.271
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  1 in total

1.  A marker-dense physical map of the Bradyrhizobium japonicum genome.

Authors:  J P Tomkins; T C Wood; M G Stacey; J T Loh; A Judd; J L Goicoechea; G Stacey; M J Sadowsky; R A Wing
Journal:  Genome Res       Date:  2001-08       Impact factor: 9.043
  1 in total

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