Literature DB >> 9066304

Formation and processing of UV photoproducts: effects of DNA sequence and chromatin environment.

G P Pfeifer1.   

Abstract

Cyclobutane pyrimidine dimers and (6-4) photoproducts are the two major classes of lesions produced in DNA by UVB and UVC irradiation. Their distribution along genes is nucleotide sequence-dependent. In vivo, the frequency of these lesions at specific sites is modulated by nucleosomes and other DNA binding proteins. Repair of UV photoproducts is dependent on the transcriptional status of the sequences to be repaired and on the chromatin environment. The formation of DNA photolesions by UV light is responsible for the induction of mutations and the development of skin cancer. To understand the mechanisms of UV mutagenesis, it is important to know how these lesions are formed, by which cellular pathways they are repaired and how they are dealt with by DNA polymerases.

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Year:  1997        PMID: 9066304     DOI: 10.1111/j.1751-1097.1997.tb08560.x

Source DB:  PubMed          Journal:  Photochem Photobiol        ISSN: 0031-8655            Impact factor:   3.421


  79 in total

1.  Cell cycle-independent removal of UV-induced pyrimidine dimers from the promoter and the transcription initiation domain of the human CDC2 gene.

Authors:  S Tommasi; A B Oxyzoglou; G P Pfeifer
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

2.  DNA repair of a single UV photoproduct in a designed nucleosome.

Authors:  J V Kosmoski; E J Ackerman; M J Smerdon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

3.  Solution structure of a DNA decamer duplex containing the stable 3' T.G base pair of the pyrimidine(6-4)pyrimidone photoproduct [(6-4) adduct]: implications for the highly specific 3' T --> C transition of the (6-4) adduct.

Authors:  J H Lee; G S Hwang; B S Choi
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-08       Impact factor: 11.205

4.  DNA damage in the nucleosome core is refractory to repair by human excision nuclease.

Authors:  R Hara; J Mo; A Sancar
Journal:  Mol Cell Biol       Date:  2000-12       Impact factor: 4.272

5.  Cbf1p modulates chromatin structure, transcription and repair at the Saccharomyces cerevisiae MET16 locus.

Authors:  J A Ferreiro; N G Powell; N Karabetsou; N A Kent; J Mellor; R Waters
Journal:  Nucleic Acids Res       Date:  2004-03-08       Impact factor: 16.971

6.  Rotational position of a 5-methylcytosine-containing cyclobutane pyrimidine dimer in a nucleosome greatly affects its deamination rate.

Authors:  Qian Song; Vincent J Cannistraro; John-Stephen Taylor
Journal:  J Biol Chem       Date:  2010-12-15       Impact factor: 5.157

Review 7.  A review of the role of the sequence-dependent electrostatic landscape in DNA alkylation patterns.

Authors:  Barry Gold; Luis M Marky; Michael P Stone; Loren D Williams
Journal:  Chem Res Toxicol       Date:  2006-11       Impact factor: 3.739

8.  Factors affecting survival of bacteriophage on tomato leaf surfaces.

Authors:  F B Iriarte; B Balogh; M T Momol; L M Smith; M Wilson; J B Jones
Journal:  Appl Environ Microbiol       Date:  2007-01-26       Impact factor: 4.792

9.  Thymine photodimer formation in DNA hairpins. Unusual conformations favor (6 - 4) vs. (2 + 2) adducts.

Authors:  Mahesh Hariharan; Karsten Siegmund; Clifton Saurel; Martin McCullagh; George C Schatz; Frederick D Lewis
Journal:  Photochem Photobiol Sci       Date:  2014-02       Impact factor: 3.982

10.  Oxidative DNA damage induced by copper and hydrogen peroxide promotes CG-->TT tandem mutations at methylated CpG dinucleotides in nucleotide excision repair-deficient cells.

Authors:  Dong-Hyun Lee; Timothy R O'Connor; Gerd P Pfeifer
Journal:  Nucleic Acids Res       Date:  2002-08-15       Impact factor: 16.971

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