Literature DB >> 9041650

P100, a transcriptional coactivator, is a human homologue of staphylococcal nuclease.

C P Ponting1.   

Abstract

Staphylococcus aureus nuclease (SNase) homologues, previously thought to be restricted to bacteria and archaea, are demonstrated by sequence analysis to be present also in eukaryotes. The human cellular coactivator p100 is shown to contain four repeats, each of which is a SNase homologue. Surprisingly, these repeats are unlikely to possess SNase-like activities as each lacks equivalent SNase catalytic residues, yet they may mediate p100's single-stranded DNA-binding function. Products of Corydalis sempervirens and Saccharomyces cerevisiae open reading frames are predicted to adopt the same fold and possess similar functions as SNase. Five additional hypothetical proteins of bacterial origin are also predicted to be active SNase-like nucleases, including one that appears to be C-terminally truncated in a manner analogous to an engineered active SNase variant. Conservation of Asp-19 and Asp-83 among these homologues suggests a re-evaluation of the roles of these residues in Ca(2+)-binding and/or catalysis.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9041650      PMCID: PMC2143632          DOI: 10.1002/pro.5560060224

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  35 in total

1.  Nucleotide sequence of a nuc gene encoding the thermonuclease of Staphylococcus intermedius.

Authors:  O Chesneau; N el Solh
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

2.  A workbench for multiple alignment construction and analysis.

Authors:  G D Schuler; S F Altschul; D J Lipman
Journal:  Proteins       Date:  1991

3.  Plant cDNA similar to a bacterial plasmid partition locus.

Authors:  A Schaller; J Schmid; N Amrhein
Journal:  Plant Physiol       Date:  1992-06       Impact factor: 8.340

4.  Nucleotide sequence of the promoter-distal region of the tra operon of plasmid R100, including traI (DNA helicase I) and traD genes.

Authors:  Y Yoshioka; Y Fujita; E Ohtsubo
Journal:  J Mol Biol       Date:  1990-07-05       Impact factor: 5.469

5.  Profile analysis: detection of distantly related proteins.

Authors:  M Gribskov; A D McLachlan; D Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

6.  Catalytic properties and specificity of the extracellular nuclease of Staphylococcus aureus.

Authors:  P Cuatrecasas; S Fuchs; C B Anfinsen
Journal:  J Biol Chem       Date:  1967-04-10       Impact factor: 5.157

7.  The binding of nucleotides and calcium to the extracellular nuclease of Staphylococcus aureus. Studies by gel filtration.

Authors:  P Cuatrecasas; S Fuchs; C B Anfinsen
Journal:  J Biol Chem       Date:  1967-07-10       Impact factor: 5.157

8.  Detection of conserved segments in proteins: iterative scanning of sequence databases with alignment blocks.

Authors:  R L Tatusov; S F Altschul; E V Koonin
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-06       Impact factor: 11.205

9.  Contributions of the polar, uncharged amino acids to the stability of staphylococcal nuclease: evidence for mutational effects on the free energy of the denatured state.

Authors:  S M Green; A K Meeker; D Shortle
Journal:  Biochemistry       Date:  1992-06-30       Impact factor: 3.162

10.  Probing the mechanism of staphylococcal nuclease with unnatural amino acids: kinetic and structural studies.

Authors:  J K Judice; T R Gamble; E C Murphy; A M de Vos; P G Schultz
Journal:  Science       Date:  1993-09-17       Impact factor: 47.728

View more
  14 in total

Review 1.  New perspectives on the diversification of the RNA interference system: insights from comparative genomics and small RNA sequencing.

Authors:  Alexander Maxwell Burroughs; Yoshinari Ando; L Aravind
Journal:  Wiley Interdiscip Rev RNA       Date:  2013-12-05       Impact factor: 9.957

2.  Boundaries and physical characterization of a new domain shared between mammalian 53BP1 and yeast Rad9 checkpoint proteins.

Authors:  Béatrice Alpha-Bazin; Alain Lorphelin; Nathalie Nozerand; Gaëlle Charier; Charles Marchetti; Frédéric Bérenguer; Joël Couprie; Bernard Gilquin; Sophie Zinn-Justin; Eric Quéméneur
Journal:  Protein Sci       Date:  2005-07       Impact factor: 6.725

3.  PTB-AS, a Novel Natural Antisense Transcript, Promotes Glioma Progression by Improving PTBP1 mRNA Stability with SND1.

Authors:  Liyuan Zhu; Qunfang Wei; Yingjiao Qi; Xiangbin Ruan; Fan Wu; Liang Li; Junjie Zhou; Wei Liu; Tao Jiang; Jing Zhang; Bin Yin; Jiangang Yuan; Boqin Qiang; Wei Han; Xiaozhong Peng
Journal:  Mol Ther       Date:  2019-06-05       Impact factor: 11.454

4.  A microarray-based genetic screen for yeast chronological aging factors.

Authors:  Mirela Matecic; Daniel L Smith; Xuewen Pan; Nazif Maqani; Stefan Bekiranov; Jef D Boeke; Jeffrey S Smith
Journal:  PLoS Genet       Date:  2010-04-22       Impact factor: 5.917

5.  Sequence and structural analysis of 4SNc-Tudor domain protein from Takifugu Rubripes.

Authors:  Jianzhou Zheng; Jian Lu; Haijun Liu; Jun Li; Keping Chen
Journal:  Bioinformation       Date:  2009-09-30

Review 6.  Tudor staphylococcal nuclease: biochemistry and functions.

Authors:  Emilio Gutierrez-Beltran; Tatiana V Denisenko; Boris Zhivotovsky; Peter V Bozhkov
Journal:  Cell Death Differ       Date:  2016-09-09       Impact factor: 15.828

7.  Structural insights into the tumor-promoting function of the MTDH-SND1 complex.

Authors:  Feng Guo; Liling Wan; Aiping Zheng; Vitali Stanevich; Yong Wei; Kenneth A Satyshur; Minhong Shen; Woojong Lee; Yibin Kang; Yongna Xing
Journal:  Cell Rep       Date:  2014-09-18       Impact factor: 9.423

8.  Nucleases in Bdellovibrio bacteriovorus contribute towards efficient self-biofilm formation and eradication of preformed prey biofilms.

Authors:  Carey Lambert; R Elizabeth Sockett
Journal:  FEMS Microbiol Lett       Date:  2013-02-11       Impact factor: 2.742

9.  Tudor-SN Regulates Milk Synthesis and Proliferation of Bovine Mammary Epithelial Cells.

Authors:  Jinxia Ao; Chengjie Wei; Yu Si; Chaochao Luo; Wei Lv; Ye Lin; Yingjun Cui; Xuejun Gao
Journal:  Int J Mol Sci       Date:  2015-12-16       Impact factor: 5.923

10.  Structural and functional insights into human Tudor-SN, a key component linking RNA interference and editing.

Authors:  Chia-Lung Li; Wei-Zen Yang; Yi-Ping Chen; Hanna S Yuan
Journal:  Nucleic Acids Res       Date:  2008-05-03       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.