Literature DB >> 9037713

Perturbation of conformational dynamics, enzymatic activity, and thermostability of beta-glycosidase from archaeon Sulfolobus solfataricus by pH and sodium dodecyl sulfate detergent.

S D'Auria1, M Rossi, R Nucci, G Irace, E Bismuto.   

Abstract

The conformational dynamics of beta-glycosidase from Sulfolobus solfataricus was investigated by following the emission decay arising from the large number of tryptophanyl residues that are homogeneously dispersed in the primary structure. The fluorescence emission is characterized by a bimodal lifetime distribution, suggesting that the enzyme structure contains rigid and flexible regions, properly located in the macromolecule. The enzyme activity and thermostability appear to be related to the dynamic properties of these regions as evidenced by perturbation studies of the enzyme structure at alkaline pH and by addition of detergents such as SDS. The pH increase affects the protein dynamics with a remarkable loss of thermal stability and activity; these changes occur without any significant variation in the secondary structure as revealed by far-UV dichroic measurements. In the presence of 0.02% (w/v) SDS at alkaline pH, the enzymatic activity and thermostability are recovered. Under these conditions, the conformational dynamics appear to be similar to that evidenced at neutral pH. Further increases in SDS concentration, at alkaline pH, render the activity and thermostability of beta-glycosidase similar to those observed in the absence of detergent.

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Year:  1997        PMID: 9037713

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  5 in total

1.  The thermophilic esterase from Archaeoglobus fulgidus: structure and conformational dynamics at high temperature.

Authors:  S D'Auria; P Herman; J R Lakowicz; E Bertoli; F Tanfani; M Rossi; G Manco
Journal:  Proteins       Date:  2000-03-01

2.  Structural and thermal stability characterization of Escherichia coli D-galactose/D-glucose-binding protein.

Authors:  Sabato D'Auria; Fabrizio Alfieri; Maria Staiano; Fabrizio Pelella; Mose' Rossi; Andrea Scirè; Fabio Tanfani; Enrico Bertoli; Zigmunt Grycznyski; Joseph R Lakowicz
Journal:  Biotechnol Prog       Date:  2004 Jan-Feb

3.  Heterogeneity in the structural dynamics of Sulfolobus solfataricus beta-glycosidase revealed by electron paramagnetic resonance and frequency domain fluorometry.

Authors:  Evgenia Lozinsky; Ferdinando Febbraio; Alexander I Shames; Gertz I Likhtenshtein; Ettore Bismuto; Roberto Nucci
Journal:  Protein Sci       Date:  2002-11       Impact factor: 6.725

4.  Tryptophanyl fluorescence lifetime distribution of hyperthermophilic beta-glycosidase from molecular dynamics simulation: a comparison with the experimental data.

Authors:  E Bismuto; P L Martelli; R Casadio; G Irace
Journal:  Protein Sci       Date:  2000-09       Impact factor: 6.725

5.  Correlation spectroscopy and molecular dynamics simulations to study the structural features of proteins.

Authors:  Antonio Varriale; Anna Marabotti; Giampiero Mei; Maria Staiano; Sabato D'Auria
Journal:  PLoS One       Date:  2013-06-04       Impact factor: 3.240

  5 in total

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