Literature DB >> 9032062

Kinetic role of early intermediates in protein folding.

H Roder1, W Colón.   

Abstract

The traditional view that partly folded intermediates are important for directing a protein toward the native state has been challenged by the notion that proteins can intrinsically fold rapidly in a single step if kinetic complications due to slow conformational events are avoided. Intermediates that accumulate within the first few milliseconds of folding are, however, a common observation even for small single-domain proteins. Recent spectroscopic studies, coupled with quantitative kinetic analysis, suggest that folding is facilitated by the rapid formation of compact intermediates with some native-like structural features.

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Year:  1997        PMID: 9032062     DOI: 10.1016/s0959-440x(97)80004-8

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  57 in total

1.  An amino acid code for protein folding.

Authors:  J Rumbley; L Hoang; L Mayne; S W Englander
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

2.  Protein folding mediated by solvation: water expulsion and formation of the hydrophobic core occur after the structural collapse.

Authors:  Margaret S Cheung; Angel E García; José N Onuchic
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

3.  A general approach to renaturation of recombinant proteins produced as inclusion bodies.

Authors:  A N Wulfson; R V Tikhonov; S E Pechenov
Journal:  Dokl Biochem Biophys       Date:  2001 Sep-Oct       Impact factor: 0.788

4.  Early formation of a beta hairpin during folding of staphylococcal nuclease H124L as detected by pulsed hydrogen exchange.

Authors:  William F Walkenhorst; Jason A Edwards; John L Markley; Heinrich Roder
Journal:  Protein Sci       Date:  2002-01       Impact factor: 6.725

5.  The ensemble folding kinetics of protein G from an all-atom Monte Carlo simulation.

Authors:  Jun Shimada; Eugene I Shakhnovich
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-06       Impact factor: 11.205

6.  Comparison of protein fragments identified by limited proteolysis and by computational cutting of proteins.

Authors:  Chung-Jung Tsai; Patrizia Polverino de Laureto; Angelo Fontana; Ruth Nussinov
Journal:  Protein Sci       Date:  2002-07       Impact factor: 6.725

7.  Partly folded states of members of the lysozyme/lactalbumin superfamily: a comparative study by circular dichroism spectroscopy and limited proteolysis.

Authors:  Patrizia Polverino de Laureto; Erica Frare; Rossella Gottardo; Herman Van Dael; Angelo Fontana
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

8.  Evidence for assembly of prions with left-handed beta-helices into trimers.

Authors:  Cédric Govaerts; Holger Wille; Stanley B Prusiner; Fred E Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-21       Impact factor: 11.205

9.  Dramatic acceleration of protein folding by stabilization of a nonnative backbone conformation.

Authors:  Ariel A Di Nardo; Dmitry M Korzhnev; Peter J Stogios; Arash Zarrine-Afsar; Lewis E Kay; Alan R Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-17       Impact factor: 11.205

10.  Folding of apocytochrome c induced by the interaction with negatively charged lipid micelles proceeds via a collapsed intermediate state.

Authors:  S E Rankin; A Watts; H Roder; T J Pinheiro
Journal:  Protein Sci       Date:  1999-02       Impact factor: 6.725

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