Literature DB >> 9013651

Optical mapping approaches to molecular genomics.

D C Schwartz1, A Samad.   

Abstract

A variety of physical mapping methods exist for the analysis of nucleic acids or genomes, including hybridization, sequence tagged site mapping, restriction enzyme fingerprinting, radiation hybrid mapping and optical mapping. Single-molecule approaches offer numerous advantages, including very high resolution, small sample size requirements, and parallel sample processing. The convergence of recent advances in new single molecule techniques, surface chemistry and machine vision technology has contributed to novel approaches to genome analysis.

Mesh:

Year:  1997        PMID: 9013651     DOI: 10.1016/s0958-1669(97)80160-7

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  9 in total

Review 1.  Imaging of single DNA molecule: applications to high-resolution genomic studies.

Authors:  J Herrick; A Bensimon
Journal:  Chromosome Res       Date:  1999       Impact factor: 5.239

2.  Partially condensed DNA conformations observed by single molecule fluorescence microscopy.

Authors:  P Serwer; S J Hayes
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

3.  Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence.

Authors:  Bridget R Kulasekara; Michael Jacobs; Yang Zhou; Zaining Wu; Elizabeth Sims; Channakhone Saenphimmachak; Laurence Rohmer; Jennifer M Ritchie; Matthew Radey; Matthew McKevitt; Theodore Larson Freeman; Hillary Hayden; Eric Haugen; Will Gillett; Christine Fong; Jean Chang; Viktoriya Beskhlebnaya; Matthew K Waldor; Mansour Samadpour; Thomas S Whittam; Rajinder Kaul; Mitchell Brittnacher; Samuel I Miller
Journal:  Infect Immun       Date:  2009-06-29       Impact factor: 3.441

Review 4.  Review of cytological studies on cellular and molecular mechanisms of uniparental (maternal or paternal) inheritance of plastid and mitochondrial genomes induced by active digestion of organelle nuclei (nucleoids).

Authors:  Tsuneyoshi Kuroiwa
Journal:  J Plant Res       Date:  2010-02-10       Impact factor: 2.629

5.  Remarks on discrete and continuous large-scale models of DNA dynamics.

Authors:  I Klapper; H Qian
Journal:  Biophys J       Date:  1998-05       Impact factor: 4.033

6.  Discrimination of Adsorbed Double-Stranded and Single-Stranded DNA Molecules on Surfaces by Fluorescence Emission Spectroscopy Using Acridine Orange Dye.

Authors:  E Hoory; J Budassi; E Pfeffer; N Cho; J Thalappillil; J Andersen; M Rafailovich; J Sokolov
Journal:  J Fluoresc       Date:  2017-08-05       Impact factor: 2.217

7.  An mt(+) gamete-specific nuclease that targets mt(-) chloroplasts during sexual reproduction in C. reinhardtii.

Authors:  Yoshiki Nishimura; Osami Misumi; Ko Kato; Noriko Inada; Tetsuya Higashiyama; Yu Momoyama; Tsuneyoshi Kuroiwa
Journal:  Genes Dev       Date:  2002-05-01       Impact factor: 11.361

8.  Consistent ultra-long DNA sequencing with automated slow pipetting.

Authors:  Trent M Prall; Emma K Neumann; Julie A Karl; Cecilia G Shortreed; David A Baker; Hailey E Bussan; Roger W Wiseman; David H O'Connor
Journal:  BMC Genomics       Date:  2021-03-12       Impact factor: 3.969

9.  A single molecule scaffold for the maize genome.

Authors:  Shiguo Zhou; Fusheng Wei; John Nguyen; Mike Bechner; Konstantinos Potamousis; Steve Goldstein; Louise Pape; Michael R Mehan; Chris Churas; Shiran Pasternak; Dan K Forrest; Roger Wise; Doreen Ware; Rod A Wing; Michael S Waterman; Miron Livny; David C Schwartz
Journal:  PLoS Genet       Date:  2009-11-20       Impact factor: 5.917

  9 in total

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