Literature DB >> 9013581

Kinetic control of the dissociation pathway of calmodulin-peptide complexes.

S E Brown1, S R Martin, P M Bayley.   

Abstract

The mechanism of dissociation reactions induced by calcium chelators has been studied for complexes of Drosophila calmodulin with target peptides, including four derived from the skeletal muscle myosin light chain kinase target sequence. Reactions were monitored by fluorescence stopped-flow techniques using a variety of intrinsic probes and the indicator Quin2. For most of the complexes, apparently biphasic kinetics were observed in several fluorescence parameters. The absence of any obvious relationship between dissociation rates and peptide affinities implies kinetic control of the dissociation pathway. A general mechanism for calcium and peptide dissociation was formulated and used in numerical simulation of the experimental data. Unexpectedly, the rate of the slowest step decreases with increasing [peptide]/[calmodulin] ratio. Numerical simulation shows this step could contain a substantial contribution from a reversible relaxation process (involving the species Ca2-calmodulin-peptide), convolved with the following step (loss of C-terminal calcium ions). The results indicate the potentially key kinetic role of the partially calcium-saturated intermediate species. They show that subtle changes in the peptide sequence can have significant effects on both the dissociation rates and also the dissociation pathway. Both effects could contribute to the variety of regulatory behavior shown by calmodulin with different target enzymes.

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Year:  1997        PMID: 9013581     DOI: 10.1074/jbc.272.6.3389

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  27 in total

1.  Enhancement by Mg2+ of domain specificity in Ca2+-dependent interactions of calmodulin with target sequences.

Authors:  S R Martin; L Masino; P M Bayley
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

2.  Multiplexed sorting of libraries on libraries: a novel method for empirical protein design by affinity-driven phage enrichment on synthetic peptide arrays.

Authors:  Claus Hultschig; Ronald Frank
Journal:  Mol Divers       Date:  2004       Impact factor: 2.943

3.  Conformational and metal-binding properties of androcam, a testis-specific, calmodulin-related protein from Drosophila.

Authors:  S R Martin; A Q Lu; J Xiao; J Kleinjung; K Beckingham; P M Bayley
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

Review 4.  Measuring the kinetics of calcium binding proteins with flash photolysis.

Authors:  Guido C Faas; Istvan Mody
Journal:  Biochim Biophys Acta       Date:  2011-10-07

5.  Mechanical and biochemical modeling of cortical oscillations in spreading cells.

Authors:  Maryna Kapustina; Gabriel E Weinreb; Nancy Costigliola; Zenon Rajfur; Ken Jacobson; Timothy C Elston
Journal:  Biophys J       Date:  2008-03-07       Impact factor: 4.033

6.  Conformational changes of calmodulin upon Ca2+ binding studied with a microfluidic mixer.

Authors:  Hye Yoon Park; Sally A Kim; Jonas Korlach; Elizabeth Rhoades; Lisa W Kwok; Warren R Zipfel; M Neal Waxham; Watt W Webb; Lois Pollack
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-04       Impact factor: 11.205

7.  Dissecting cooperative calmodulin binding to CaM kinase II: a detailed stochastic model.

Authors:  Michael J Byrne; John A Putkey; M Neal Waxham; Yoshihisa Kubota
Journal:  J Comput Neurosci       Date:  2009-07-17       Impact factor: 1.621

8.  A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II.

Authors:  Shirley Pepke; Tamara Kinzer-Ursem; Stefan Mihalas; Mary B Kennedy
Journal:  PLoS Comput Biol       Date:  2010-02-12       Impact factor: 4.475

9.  Conformational States and kinetics of the calcium binding domain of NADPH oxidase 5.

Authors:  Chin-Chuan Wei; Nicole Motl; Kelli Levek; Liu Qi Chen; Ya-Ping Yang; Tremylla Johnson; Lindsey Hamilton; Dennis J Stuehr
Journal:  Open Biochem J       Date:  2010-05-18

10.  Regulatory implications of a novel mode of interaction of calmodulin with a double IQ-motif target sequence from murine dilute myosin V.

Authors:  Stephen R Martin; Peter M Bayley
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

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