Literature DB >> 8997488

Mechanisms of nonhomologous DNA end-joining in frogs, mice and men.

P Daza1, S Reichenberger, B Göttlich, M Hagmann, E Feldmann, P Pfeiffer.   

Abstract

DNA end-joining, a process related to illegitimate recombination and capable of rejoining unrelated pairs of DNA ends in the absence of sequence homology, is considered the major pathway of double-strand break (DSB) repair in mammalian cells. Whole cell and nuclear extracts from three human and one mouse cell line were investigated for their capacities to promote nonhomologous DNA end-joining and their relative activities of DNA-PK, a mammalian DNA end-binding protein complex implicated in DSB-repair. The levels of DNA end-joining and the spectra of junctions of the human systems were identical with the ones of a previously described cell-free joining system derived from Xenopus laevis eggs. Due to the presence of potent 3'-5'-exonuclease activities the mouse system displayed decreased levels of DNA end-joining and larger fractions of junctions containing deletions but otherwise the basic mechanisms of junction formation appeared to be identical with the Xenopus system. DNA-PK activity was found to be equally low in the Xenopus and the mouse system but 4- to 6-fold increased in the human systems. Our results suggest that the mechanisms of DNA end-joining may be modulated by the level of exonuclease activities and/or DNA end-protecting factors but are otherwise highly conserved in vertebrate cells.

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Year:  1996        PMID: 8997488     DOI: 10.1515/bchm3.1996.377.12.775

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  11 in total

1.  Ku-dependent nonhomologous DNA end joining in Xenopus egg extracts.

Authors:  P Labhart
Journal:  Mol Cell Biol       Date:  1999-04       Impact factor: 4.272

2.  DNA double-strand break repair in cell-free extracts from Ku80-deficient cells: implications for Ku serving as an alignment factor in non-homologous DNA end joining.

Authors:  E Feldmann; V Schmiemann; W Goedecke; S Reichenberger; P Pfeiffer
Journal:  Nucleic Acids Res       Date:  2000-07-01       Impact factor: 16.971

3.  Efficiency of nonhomologous DNA end joining varies among somatic tissues, despite similarity in mechanism.

Authors:  Sheetal Sharma; Bibha Choudhary; Sathees C Raghavan
Journal:  Cell Mol Life Sci       Date:  2010-08-03       Impact factor: 9.261

4.  Nonhomologous end-joining in a cell-free extract from the cultured silkworm cell line BmN4.

Authors:  Arisa Ohsaki; Kazuhiro Iiyama; Yoshitaka Miyagawa; Yutaka Kawaguchi; Katsumi Koga; Takahiro Kusakabe
Journal:  Mol Biol Rep       Date:  2005-03       Impact factor: 2.316

5.  Simian virus 40 strains with novel properties generated by replacing the viral enhancer with synthetic oligonucleotides.

Authors:  Viola Günther; Till Strassen; Uschi Lindert; Patrizia Dagani; Dominique Waldvogel; Oleg Georgiev; Walter Schaffner; Tobias Bethge
Journal:  J Virol       Date:  2012-01-11       Impact factor: 5.103

6.  Nonhomologous DNA end joining in cell-free extracts.

Authors:  Sheetal Sharma; Sathees C Raghavan
Journal:  J Nucleic Acids       Date:  2010-09-22

7.  The alternative end-joining pathway for repair of DNA double-strand breaks requires PARP1 but is not dependent upon microhomologies.

Authors:  Wael Y Mansour; Tim Rhein; Jochen Dahm-Daphi
Journal:  Nucleic Acids Res       Date:  2010-05-18       Impact factor: 16.971

8.  Deficiency in 3'-phosphoglycolate processing in human cells with a hereditary mutation in tyrosyl-DNA phosphodiesterase (TDP1).

Authors:  Tong Zhou; Jae Wan Lee; Haritha Tatavarthi; James R Lupski; Kristoffer Valerie; Lawrence F Povirk
Journal:  Nucleic Acids Res       Date:  2005-01-12       Impact factor: 16.971

9.  Phosphorylation in the serine/threonine 2609-2647 cluster promotes but is not essential for DNA-dependent protein kinase-mediated nonhomologous end joining in human whole-cell extracts.

Authors:  Lawrence F Povirk; Rui-Zhe Zhou; Dale A Ramsden; Susan P Lees-Miller; Kristoffer Valerie
Journal:  Nucleic Acids Res       Date:  2007-05-25       Impact factor: 16.971

10.  Tolerance for 8-oxoguanine but not thymine glycol in alignment-based gap filling of partially complementary double-strand break ends by DNA polymerase lambda in human nuclear extracts.

Authors:  Rui-Zhe Zhou; Luis Blanco; Miguel Garcia-Diaz; Katarzyna Bebenek; Thomas A Kunkel; Lawrence F Povirk
Journal:  Nucleic Acids Res       Date:  2008-04-01       Impact factor: 16.971

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