Literature DB >> 8994619

Homogeneous nucleation in sickle hemoglobin: stochastic measurements with a parallel method.

Z Cao1, F A Ferrone.   

Abstract

The homogeneous nucleation rate for sickle hemoglobin polymerization has been measured for concentrations from 3.9 to 4.9 mM and temperatures from 13 degrees C to 35 degrees C by observing the stochastic fluctuations of the time to complete 10% of the reaction after photolysis of the carboxy derivative. To allow efficient data collection, a mesh was used to divide the photolysis beam into an array of smaller beams, which allowed parallel observation of about 100 different regions. Nucleation rates measured here are consistent with more restricted previously published data and, when combined with directly measured monomer addition rates, are consistent with previous analysis of progress curves. By describing these rates with equilibrium nucleation theory, the concentration of nuclei and hence their stability can be ascertained. Consequently, the chemical potential by which a monomer is attached to the polymer is determined. This attachment energy ranges from -6.6 to -8.0 kcal/mol between 15 degrees C and 35 degrees C. The enthalpic part of that chemical potential is found to be equal to the enthalpy determined by solubility measurements, as expected from thermodynamic considerations. The entropic portion of the contact chemical potential contributes from -21.4 to -8.7 kcal/mol. The vibrational chemical potential of monomers in the polymer ranges from -25.7 to -27.4 kcal/mol over the same temperatures.

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Year:  1997        PMID: 8994619      PMCID: PMC1184323          DOI: 10.1016/S0006-3495(97)78673-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  14 in total

1.  Calculation of the free energy of association for protein complexes.

Authors:  N Horton; M Lewis
Journal:  Protein Sci       Date:  1992-01       Impact factor: 6.725

2.  Monomer diffusion and polymer alignment in domains of sickle hemoglobin.

Authors:  M R Cho; F A Ferrone
Journal:  Biophys J       Date:  1992-07       Impact factor: 4.033

3.  Entropy changes accompanying association reactions of proteins.

Authors:  I Z STEINBERG; H A SCHERAGA
Journal:  J Biol Chem       Date:  1963-01       Impact factor: 5.157

4.  Thermodynamics of gelation of sickle cell deoxyhemoglobin.

Authors:  P D Ross; J Hofrichter; W A Eaton
Journal:  J Mol Biol       Date:  1977-09-15       Impact factor: 5.469

5.  Fluctuations in the polymerization of sickle hemoglobin. A simple analytic model.

Authors:  A Szabo
Journal:  J Mol Biol       Date:  1988-02-05       Impact factor: 5.469

6.  Nucleation and growth of fibres and gel formation in sickle cell haemoglobin.

Authors:  R E Samuel; E D Salmon; R W Briehl
Journal:  Nature       Date:  1990-06-28       Impact factor: 49.962

7.  Kinetics of sickle hemoglobin polymerization. III. Nucleation rates determined from stochastic fluctuations in polymerization progress curves.

Authors:  J Hofrichter
Journal:  J Mol Biol       Date:  1986-06-05       Impact factor: 5.469

8.  The solubility of amino acids and two glycine peptides in aqueous ethanol and dioxane solutions. Establishment of a hydrophobicity scale.

Authors:  Y Nozaki; C Tanford
Journal:  J Biol Chem       Date:  1971-04-10       Impact factor: 5.157

9.  The contribution of vibrational entropy to molecular association. The dimerization of insulin.

Authors:  B Tidor; M Karplus
Journal:  J Mol Biol       Date:  1994-05-06       Impact factor: 5.469

10.  A 50th order reaction predicted and observed for sickle hemoglobin nucleation.

Authors:  Z Cao; F A Ferrone
Journal:  J Mol Biol       Date:  1996-02-23       Impact factor: 5.469

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  17 in total

1.  A model for the sickle hemoglobin fiber using both mutation sites.

Authors:  A Roufberg; F A Ferrone
Journal:  Protein Sci       Date:  2000-05       Impact factor: 6.725

2.  Nonideality and the nucleation of sickle hemoglobin.

Authors:  M Ivanova; R Jasuja; S Kwong; R W Briehl; F A Ferrone
Journal:  Biophys J       Date:  2000-08       Impact factor: 4.033

3.  Heterogeneous nucleation and crowding in sickle hemoglobin: an analytic approach.

Authors:  Frank A Ferrone; Maria Ivanova; Ravi Jasuja
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

4.  Liquid-liquid separation in solutions of normal and sickle cell hemoglobin.

Authors:  Oleg Galkin; Kai Chen; Ronald L Nagel; Rhoda Elison Hirsch; Peter G Vekilov
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-17       Impact factor: 11.205

5.  Understanding the shape of sickled red cells.

Authors:  Garrott W Christoph; James Hofrichter; William A Eaton
Journal:  Biophys J       Date:  2004-11-12       Impact factor: 4.033

6.  Nucleation of sickle hemoglobin mixed with hemoglobin A: experimental and theoretical studies of hybrid-forming mixtures.

Authors:  Maria Rotter; Donna Yosmanovich; Robin W Briehl; Suzanna Kwong; Frank A Ferrone
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

7.  The effects of erythrocyte membranes on the nucleation of sickle hemoglobin.

Authors:  Alexey Aprelev; Maria A Rotter; Zipora Etzion; Robert M Bookchin; Robin W Briehl; Frank A Ferrone
Journal:  Biophys J       Date:  2005-01-14       Impact factor: 4.033

8.  Heterogeneous nucleation in sickle hemoglobin: experimental validation of a structural mechanism.

Authors:  Maria A Rotter; Suzanna Kwong; Robin W Briehl; Frank A Ferrone
Journal:  Biophys J       Date:  2005-07-29       Impact factor: 4.033

9.  Two-step mechanism of homogeneous nucleation of sickle cell hemoglobin polymers.

Authors:  Oleg Galkin; Weichun Pan; Luis Filobelo; Rhoda Elison Hirsch; Ronald L Nagel; Peter G Vekilov
Journal:  Biophys J       Date:  2007-04-20       Impact factor: 4.033

10.  Metastable polymerization of sickle hemoglobin in droplets.

Authors:  Alexey Aprelev; Weijun Weng; Mikhail Zakharov; Maria Rotter; Donna Yosmanovich; Suzanna Kwong; Robin W Briehl; Frank A Ferrone
Journal:  J Mol Biol       Date:  2007-04-19       Impact factor: 5.469

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