Literature DB >> 8994589

Coupling of protein surface hydrophobicity change to ATP hydrolysis by myosin motor domain.

M Suzuki1, J Shigematsu, Y Fukunishi, Y Harada, T Yanagida, T Kodama.   

Abstract

Dielectric spectroscopy with microwaves in the frequency range between 0.2 and 20 GHz was used to study the hydration of myosin subfragment 1 (S1). The data were analyzed by a method recently devised, which can resolve the total amount of water restrained by proteins into two components, one with a rotational relaxation frequency (fc) in the gigahertz region (weakly restrained water) and the other with lower fc (strongly restrained water). The weight ratio of total restrained water to S1 protein thus obtained (0.35), equivalent to 2100 water molecules per S1 molecule, is not much different from the values (0.3-0.4) for other proteins. The weakly restrained component accounts for about two-thirds of the total restrained water, which is in accord with the number of water molecules estimated from the solvent-accessible surface area of alkyl groups on the surface of the atomic model of S1. The number of strongly restrained water molecules coincides with the number of solvent-accessible charged or polar atoms. The dynamic behavior of the S1-restrained water during the ATP hydrolysis was also examined in a time-resolved mode. The result indicates that when S1 changes from the S1.ADP state into the S1.ADP.P1 state (ADP release followed by ATP binding and cleavage), about 9% of the weakly restrained waters are released, which are restrained again on slow P1 release. By contrast, there is no net mobilization of strongly restrained component. The observed changes in S1 hydration are quantitatively consistent with the accompanying large entropy and heat capacity changes estimated by calorimetry (Kodama, 1985), indicating that the protein surface hydrophobicity change plays a crucial role in the enthalpy-entropy compensation effects observed in the steps of S1 ATP hydrolysis.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 8994589      PMCID: PMC1184293          DOI: 10.1016/S0006-3495(97)78643-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  15 in total

1.  Separation of subfragment-1 isoenzymes from rabbit skeletal muscle myosin.

Authors:  A G Weeds; R S Taylor
Journal:  Nature       Date:  1975-09-04       Impact factor: 49.962

2.  The myosin SH2-50-kilodalton fragment cross-link: location and consequences.

Authors:  P Chaussepied; M F Morales; R Kassab
Journal:  Biochemistry       Date:  1988-03-08       Impact factor: 3.162

3.  Accurate modeling of protein conformation by automatic segment matching.

Authors:  M Levitt
Journal:  J Mol Biol       Date:  1992-07-20       Impact factor: 5.469

Review 4.  Thermodynamic analysis of muscle ATPase mechanisms.

Authors:  T Kodama
Journal:  Physiol Rev       Date:  1985-04       Impact factor: 37.312

5.  Solvation energy in protein folding and binding.

Authors:  D Eisenberg; A D McLachlan
Journal:  Nature       Date:  1986 Jan 16-22       Impact factor: 49.962

6.  Measured change in protein solvation with substrate binding and turnover.

Authors:  R P Rand; N L Fuller; P Butko; G Francis; P Nicholls
Journal:  Biochemistry       Date:  1993-06-15       Impact factor: 3.162

7.  Binding of gizzard smooth muscle myosin subfragment 1 to actin in the presence and absence of adenosine 5'-triphosphate.

Authors:  L E Greene; J R Sellers; E Eisenberg; R S Adelstein
Journal:  Biochemistry       Date:  1983-02-01       Impact factor: 3.162

8.  Three-dimensional structure of myosin subfragment-1: a molecular motor.

Authors:  I Rayment; W R Rypniewski; K Schmidt-Bäse; R Smith; D R Tomchick; M M Benning; D A Winkelmann; G Wesenberg; H M Holden
Journal:  Science       Date:  1993-07-02       Impact factor: 47.728

9.  Mechanism of adenosine 5'-triphosphate cleavage by myosin: studies with oxygen-18-labeled adenosine 5'-triphosphate.

Authors:  M A Geeves; M R Webb; C F Midelfort; D R Trentham
Journal:  Biochemistry       Date:  1980-10-14       Impact factor: 3.162

10.  The initial phosphate burst in ATP hydrolysis by myosin and subfragment-1 as studied by a modified malachite green method for determination of inorganic phosphate.

Authors:  T Kodama; K Fukui; K Kometani
Journal:  J Biochem       Date:  1986-05       Impact factor: 3.387

View more
  7 in total

1.  Molecular dynamics of hinge-bending motion of IgG vanishing with hydrolysis by papain.

Authors:  Y Hayashi; N Miura; J Isobe; N Shinyashiki; S Yagihara
Journal:  Biophys J       Date:  2000-08       Impact factor: 4.033

2.  Hydration of apomyoglobin in native, molten globule, and unfolded states by using microwave dielectric spectroscopy.

Authors:  Takashi Kamei; Motohisa Oobatake; Makoto Suzuki
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

3.  Hyper-mobile water is induced around actin filaments.

Authors:  Syed Rashel Kabir; Keiichi Yokoyama; Koshin Mihashi; Takao Kodama; Makoto Suzuki
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

Review 4.  Energetics of muscle contraction: further trials.

Authors:  Kazuhiro Yamada
Journal:  J Physiol Sci       Date:  2016-07-13       Impact factor: 2.781

5.  Modulation of actomyosin motor function by 1-hexanol.

Authors:  Hideyuki Komatsu; Taeko Shigeoka; Tetsuo Ohno; Kuniyoshi Kaseda; Takeshi Kanno; Yoko Matsumoto; Makoto Suzuki; Takao Kodama
Journal:  J Muscle Res Cell Motil       Date:  2004       Impact factor: 2.698

6.  Load-dependent sliding direction change of a myosin head on an actin molecule and its energetic aspects: Energy borrowing model of a cross-bridge cycle.

Authors:  Toshikazu Majima
Journal:  Biophysics (Nagoya-shi)       Date:  2009-03-23

7.  Hydration of AMP and ATP molecules in aqueous solution and solid films.

Authors:  Dzhigangir Faizullin; Nataliya Zakharchenko; Yuriy Zuev; Alexander Puzenko; Evgeniya Levy; Yuri Feldman
Journal:  Int J Mol Sci       Date:  2013-11-20       Impact factor: 5.923

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.