Literature DB >> 8987458

Computational comparisons of model genomes.

C Ouzounis1, G Casari, C Sander, J Tamames, A Valencia.   

Abstract

Complete genomes from model organisms provide new challenges for computational molecular biology. Novel questions emerge from the genome data obtained from the functional prediction of thousands of gene products. In this review, we present some approaches to the computational comparison of genomes, based on sequence and text analysis, and comparisons of genome composition and gene order.

Mesh:

Year:  1996        PMID: 8987458     DOI: 10.1016/0167-7799(96)10043-3

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  4 in total

1.  An efficient algorithm for large-scale detection of protein families.

Authors:  A J Enright; S Van Dongen; C A Ouzounis
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

2.  Sequence conserved for subcellular localization.

Authors:  Rajesh Nair; Burkhard Rost
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

3.  The underlying pathway structure of biochemical reaction networks.

Authors:  C H Schilling; B O Palsson
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-14       Impact factor: 11.205

4.  Quantitative assessment of relationship between sequence similarity and function similarity.

Authors:  Trupti Joshi; Dong Xu
Journal:  BMC Genomics       Date:  2007-07-09       Impact factor: 3.969

  4 in total

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