Literature DB >> 8980473

Plant mRNA 3'-end formation.

H M Rothnie1.   

Abstract

Our understanding of how the 3' ends of mRNAs are formed in plants is rudimentary compared to what we know about this process in other eukaryotes. The salient features of plant pre-mRNAs that signal cleavage and polyadenylation remain obscure, and the biochemical mechanism is as yet wholly uncharacterized. Nevertheless, despite the lack of universally conserved cis-acting motifs, a common underlying architecture is emerging from functional analyses of plant poly(A) signals, allowing meaningful comparison with components of poly(A) signals in other eukaryotes. A plant poly(A) signal consists of one or more near-upstream elements (NUE), each directing processing at a poly(A) site a short distance downstream of it, and an extensive far-upstream element (FUE) that enhances processing efficiency at all sites. By analogy with other systems, a model for a plant 3'-end processing complex can be proposed. Plant poly(A) polymerases have been isolated and partially characterised. These, together with hints that some processing factors are conserved in different organisms, opens promising avenues toward initial characterisation of the trans-acting factors involved in 3'-end formation of mRNAs in higher plants.

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Year:  1996        PMID: 8980473     DOI: 10.1007/bf00039376

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  113 in total

Review 1.  The biochemistry of 3'-end cleavage and polyadenylation of messenger RNA precursors.

Authors:  E Wahle; W Keller
Journal:  Annu Rev Biochem       Date:  1992       Impact factor: 23.643

2.  Termination of transcription in an 'in vitro' system is dependent on a polyadenylation sequence.

Authors:  V J Miralles
Journal:  Nucleic Acids Res       Date:  1991-07-11       Impact factor: 16.971

3.  Functional analysis of the 3' control region of the potato wound-inducible proteinase inhibitor II gene.

Authors:  G An; A Mitra; H K Choi; M A Costa; K An; R W Thornburg; C A Ryan
Journal:  Plant Cell       Date:  1989-01       Impact factor: 11.277

4.  The leading sequence of caulimovirus large RNA can be folded into a large stem-loop structure.

Authors:  J Fütterer; K Gordon; J M Bonneville; H Sanfaçon; B Pisan; J Penswick; T Hohn
Journal:  Nucleic Acids Res       Date:  1988-09-12       Impact factor: 16.971

Review 5.  A complex protein assembly catalyzes polyadenylation of mRNA precursors.

Authors:  J L Manley
Journal:  Curr Opin Genet Dev       Date:  1995-04       Impact factor: 5.578

Review 6.  Translational regulation in development.

Authors:  D Curtis; R Lehmann; P D Zamore
Journal:  Cell       Date:  1995-04-21       Impact factor: 41.582

7.  Nucleotide sequence and transcript map of the Agrobacterium tumefaciens Ti plasmid-encoded octopine synthase gene.

Authors:  H De Greve; P Dhaese; J Seurinck; M Lemmers; M Van Montagu; J Schell
Journal:  J Mol Appl Genet       Date:  1982

8.  Upstream sequences other than AAUAAA are required for efficient messenger RNA 3'-end formation in plants.

Authors:  B D Mogen; M H MacDonald; R Graybosch; A G Hunt
Journal:  Plant Cell       Date:  1990-12       Impact factor: 11.277

9.  Extreme heterogeneity of polyadenylation sites in mRNAs encoding chloroplast RNA-binding proteins in Nicotiana plumbaginifolia.

Authors:  U Klahre; M Hemmings-Mieszczak; W Filipowicz
Journal:  Plant Mol Biol       Date:  1995-06       Impact factor: 4.076

10.  Poly(A) site selection in the HIV-1 provirus: inhibition of promoter-proximal polyadenylation by the downstream major splice donor site.

Authors:  M P Ashe; P Griffin; W James; N J Proudfoot
Journal:  Genes Dev       Date:  1995-12-01       Impact factor: 11.361

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  44 in total

1.  In silico detection of control signals: mRNA 3'-end-processing sequences in diverse species.

Authors:  J H Graber; C R Cantor; S C Mohr; T F Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  Posttranscriptional gene silencing of gn1 in tobacco triggers accumulation of truncated gn1-derived RNA species.

Authors:  K Litière; G J van Eldik; J J Jacobs; M Van Montagu; M Cornelissen
Journal:  RNA       Date:  1999-10       Impact factor: 4.942

3.  Upstream and downstream sequence elements determine the specificity of the rice tungro bacilliform virus promoter and influence RNA production after transcription initiation.

Authors:  A Klöti; C Henrich; S Bieri; X He; G Chen; P K Burkhardt; J Wünn; P Lucca; T Hohn; I Potrykus; J Fütterer
Journal:  Plant Mol Biol       Date:  1999-05       Impact factor: 4.076

4.  Expression of tandem invertase genes associated with sexual and vegetative growth cycles in potato.

Authors:  A L Maddison; P E Hedley; R C Meyer; N Aziz; D Davidson; G C Machray
Journal:  Plant Mol Biol       Date:  1999-12       Impact factor: 4.076

5.  UBP1, a novel hnRNP-like protein that functions at multiple steps of higher plant nuclear pre-mRNA maturation.

Authors:  M H Lambermon; G G Simpson; D A Wieczorek Kirk; M Hemmings-Mieszczak; U Klahre; W Filipowicz
Journal:  EMBO J       Date:  2000-04-03       Impact factor: 11.598

Review 6.  Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis.

Authors:  J Zhao; L Hyman; C Moore
Journal:  Microbiol Mol Biol Rev       Date:  1999-06       Impact factor: 11.056

7.  Alternative transcription initiation sites and polyadenylation sites are recruited during Mu suppression at the rf2a locus of maize.

Authors:  Xiangqin Cui; An-Ping Hsia; Feng Liu; Daniel A Ashlock; Roger P Wise; Patrick S Schnable
Journal:  Genetics       Date:  2003-02       Impact factor: 4.562

8.  Low glutelin content1: a dominant mutation that suppresses the glutelin multigene family via RNA silencing in rice.

Authors:  Makoto Kusaba; Kenzo Miyahara; Shuichi Iida; Hiroyuki Fukuoka; Toshiya Takano; Hidenori Sassa; Minoru Nishimura; Takeshi Nishio
Journal:  Plant Cell       Date:  2003-06       Impact factor: 11.277

9.  The presence of a chromatin boundary appears to shield a transgene in tobacco from RNA silencing.

Authors:  Ludmila Mlynárová; Andrea Hricová; Annelies Loonen; Jan-Peter Nap
Journal:  Plant Cell       Date:  2003-09       Impact factor: 11.277

10.  Post-transcriptional gene silencing of GBSSI in potato: effects of size and sequence of the inverted repeats.

Authors:  H J B Heilersig; A Loonen; M Bergervoet; A M A Wolters; R G F Visser
Journal:  Plant Mol Biol       Date:  2006-03       Impact factor: 4.076

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