Literature DB >> 8976154

It's the genes! EST access to human genome content.

D Gerhold1, C T Caskey.   

Abstract

ESTs or 'expressed sequence tags' are DNA sequences read from both ends of expressed gene fragments. The Merck-WashU EST Project and several other public EST projects are being performed to rapidly discover the complement of human genes, and make them easily accessible. These ESTs are widely used to discover novel members of gene families, to map genes to chromosomes as 'sequence-tagged sites' (STSs), and to identify mutations leading to heritable diseases. Informatic strategies for querying the EST databases are discussed, as well as the strengths and weaknesses of the EST data. There is a compelling need to build on the informatic synthesis of human gene data, and to devise facile methods for determining gene functions.

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Year:  1996        PMID: 8976154     DOI: 10.1002/bies.950181207

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  15 in total

1.  Identification of candidate coding region single nucleotide polymorphisms in 165 human genes using assembled expressed sequence tags.

Authors:  K Garg; P Green; D A Nickerson
Journal:  Genome Res       Date:  1999-11       Impact factor: 9.043

2.  Mitochondrial aspartate aminotransferase: direction of a single protein with two distinct functions to two subcellular sites does not require alternative splicing of the mRNA.

Authors:  M W Bradbury; P D Berk
Journal:  Biochem J       Date:  2000-02-01       Impact factor: 3.857

3.  In silico cloning of novel endothelial-specific genes.

Authors:  L Huminiecki; R Bicknell
Journal:  Genome Res       Date:  2000-11       Impact factor: 9.043

4.  TissueInfo: high-throughput identification of tissue expression profiles and specificity.

Authors:  L Skrabanek; F Campagne
Journal:  Nucleic Acids Res       Date:  2001-11-01       Impact factor: 16.971

5.  Novel relationships among ten fish model species revealed based on a phylogenomic analysis using ESTs.

Authors:  Dirk Steinke; Walter Salzburger; Axel Meyer
Journal:  J Mol Evol       Date:  2006-05-11       Impact factor: 2.395

6.  A strategy for genome-wide gene analysis: integrated procedure for gene identification.

Authors:  S M Wang; J D Rowley
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-29       Impact factor: 11.205

Review 7.  Patents in genomics and human genetics.

Authors:  Robert Cook-Deegan; Christopher Heaney
Journal:  Annu Rev Genomics Hum Genet       Date:  2010       Impact factor: 8.929

8.  Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee.

Authors:  Charles W Whitfield; Mark R Band; Maria F Bonaldo; Charu G Kumar; Lei Liu; Jose R Pardinas; Hugh M Robertson; M Bento Soares; Gene E Robinson
Journal:  Genome Res       Date:  2002-04       Impact factor: 9.043

9.  Three proteins involved in Caenorhabditis elegans vulval invagination are similar to components of a glycosylation pathway.

Authors:  T Herman; H R Horvitz
Journal:  Proc Natl Acad Sci U S A       Date:  1999-02-02       Impact factor: 11.205

10.  Expressed sequence tags from larval gut of the European corn borer (Ostrinia nubilalis): exploring candidate genes potentially involved in Bacillus thuringiensis toxicity and resistance.

Authors:  Chitvan Khajuria; Yu Cheng Zhu; Ming-Shun Chen; Lawrent L Buschman; Randall A Higgins; Jianxiu Yao; Andre Lb Crespo; Blair D Siegfried; Subbaratnam Muthukrishnan; Kun Yan Zhu
Journal:  BMC Genomics       Date:  2009-06-29       Impact factor: 3.969

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