Literature DB >> 8973537

Phylogenetic justification for splitting the Rymovirus genus of the taxonomic family Potyviridae.

S N Salm1, M E Rey, E P Rybicki.   

Abstract

The Potyviridae family has been divided into four genera on the basis of vector transmission, as follows: Potyvirus genus (aphid), Rymovirus genus (mite), Bymovirus genus (fungus) and Ipomovirus genus (whitefly). However recent sequence comparisons of the coat protein and 3' NCR regions of the potyviruses have demonstrated that the rymoviruses appear to be a group of two unrelated clusters namely Ryegrass Mosaic Virus (RGMV), Agropyron Mosaic Virus (AgMV) and Hordeum Mosaic Virus (HoMV) in one group and Wheat Streak Mosaic Virus (WSMV) and Brome Streak Mosaic Virus (BrSMV) in the second group. We therefore propose that RGMV, AgMV and HoMV remain in the genus Rymovirus and WSMV and BrSMV form a separate genus, possibly the Whestrevirus genus.

Entities:  

Mesh：

Year:  1996        PMID： 8973537     DOI： 10.1007/bf01718229

Source DB:  PubMed          Journal:  Arch Virol        ISSN： 0304-8608            Impact factor:   2.574


  12 in total

1.  Coat protein phylogeny and systematics of potyviruses.

Authors:  E P Rybicki; D D Shukla
Journal:  Arch Virol Suppl       Date:  1992

Review 2.  Sequence data as the major criterion for potyvirus classification.

Authors:  C W Ward; N M McKern; M J Frenkel; D D Shukla
Journal:  Arch Virol Suppl       Date:  1992

3.  Molecular evidence that the whitefly-transmitted sweetpotato mild mottle virus belongs to a distinct genus of the Potyviridae.

Authors:  D Colinet; J Kummert; P Lepoivre
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

Review 4.  Identification and classification of potyviruses on the basis of coat protein sequence data and serology. Brief review.

Authors:  D D Shukla; C W Ward
Journal:  Arch Virol       Date:  1989       Impact factor: 2.574

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  Molecular cloning and nucleotide sequencing of the 3'-terminal region of a South African isolate of ryegrass mosaic virus RNA and in vitro expression of the coat protein gene.

Authors:  S N Salm; M E Rey; R French
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

7.  cDNA cloning and nucleotide sequence of the wheat streak mosaic virus capsid protein gene.

Authors:  C L Niblett; K R Zagula; L A Calvert; T L Kendall; D M Stark; C E Smith; R N Beachy; S A Lommel
Journal:  J Gen Virol       Date:  1991-03       Impact factor: 3.891

8.  Nucleotide sequence of barley yellow mosaic virus RNA 1: a close evolutionary relationship with potyviruses.

Authors:  S Kashiwazaki; Y Minobe; T Omura; H Hibino
Journal:  J Gen Virol       Date:  1990-12       Impact factor: 3.891

Review 9.  Taxonomy of potyviruses: current problems and some solutions.

Authors:  C W Ward; D D Shukla
Journal:  Intervirology       Date:  1991       Impact factor: 1.763

10.  The complete nucleotide sequence and genome organization of the mite-transmitted brome streak mosaic rymovirus in comparison with those of potyviruses.

Authors:  R Götz; E Maiss
Journal:  J Gen Virol       Date:  1995-08       Impact factor: 3.891
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  4 in total

1.  Identification and characterization of a novel Tritimovirus species isolated from wild Trisetum flavescens L., family Poaceae.

Authors:  Mohamed Hassan; Lenka Sirlova; Milan Jokes; Josef Vacke
Journal:  Virus Genes       Date:  2009-06-16       Impact factor: 2.332

2.  Characterization and genetic diversity of sugarcane streak mosaic virus causing mosaic in sugarcane.

Authors:  R Viswanathan; M Balamuralikrishnan; R Karuppaiah
Journal:  Virus Genes       Date:  2008-04-22       Impact factor: 2.332

Review 3.  Wheat curl mite, Aceria tosichella, and transmitted viruses: an expanding pest complex affecting cereal crops.

Authors:  Denise Navia; Renata Santos de Mendonça; Anna Skoracka; Wiktoria Szydło; Danuta Knihinicki; Gary L Hein; Paulo Roberto Valle da Silva Pereira; Graciela Truol; Douglas Lau
Journal:  Exp Appl Acarol       Date:  2012-11-22       Impact factor: 2.132

4.  Analyses of the complete sequence of the genome of wheat Eqlid mosaic virus, a novel species in the genus Tritimovirus.

Authors:  M Rastegar; K Izadpanah; M Masumi; M Siampour; A Zare; A Afsharifar
Journal:  Virus Genes       Date:  2008-07-22       Impact factor: 2.332
  4 in total

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