Literature DB >> 8968607

Electrostatics and electrodynamics of bacteriorhodopsin.

D Porschke1.   

Abstract

The stationary electric dichroism of bacteriorhodopsin is in qualitative, but not quantitative, agreement with the orientation function for disks having a permanent dipole directed perpendicular to the plane and an induced dipole in the plane. Fits of the orientation function to data measured at low field strengths demonstrate: an increase of the permanent dipole moment mu with the square of the disk radius r2, whereas the polarizability alpha increases with r4; the ionic strength dependence is small for mu and clearly stronger for alpha; the permanent dipole moment is 4x10(6) D at r = 0.5 micron. According to the risetime constants, the induced dipole does not saturate and increases to 4x10(8) D at 40 kV/cm and r = 0.5 micron. The data indicate that the permanent dipole is not of some interfacial character but is due to a real assymetry of the charge distribution. The experimental dipole moment per protein monomer is approximately 55 D, whereas calculations based on the structure of Grigorieff et al. (Grigorieff, N., T.A. Ceska, K.H. Downing, J.M. Baldwin, and R. Henderson. 1996. Electron-crystallographic refinement of the structure of bacteriorhodopsin. J. Mol. Biol. 259:393-421) provide a dipole moment of approximately 570 D. The difference is probably due to a nonsymmetric distribution of charged lipid residues. It is concluded that experimental dipole moments reflect the mu-potential at the plane of shear for rotational diffusion, in analogy to the sigma-potential used for translational diffusion. It is suggested that the permanent dipole of bacteriorhodopsin supports proton transport by attraction of protons inside and repulsion of protons outside of the cell. Dichroism rise curves at field strengths between E = 150 and 800 V/cm reveal an exponential component with time constants tau 3r in the range between 1 and 40 ms, which is not found in Brownian dynamics simulations on a disk structure using hydrodynamic and electric parameters characteristic of bacteriorhodopsin disks. The experimental data suggest that this process reflects a cooperative change of the bacteriorhodopsin structure, which is induced already at a remarkably low field strength of approximately 150 V/cm.

Entities:  

Mesh:

Substances:

Year:  1996        PMID: 8968607      PMCID: PMC1233825          DOI: 10.1016/S0006-3495(96)79531-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  31 in total

Review 1.  Purple membrane: surface charge density and the multiple effect of pH and cations.

Authors:  R Jonas; Y Koutalos; T G Ebrey
Journal:  Photochem Photobiol       Date:  1990-12       Impact factor: 3.421

2.  Molecular structure determination by electron microscopy of unstained crystalline specimens.

Authors:  P N Unwin; R Henderson
Journal:  J Mol Biol       Date:  1975-05-25       Impact factor: 5.469

3.  Electrodichroism of purple membrane: ionic strength dependence.

Authors:  E Papp; G Fricsovszky; G Meszéna
Journal:  Biophys J       Date:  1986-05       Impact factor: 4.033

4.  Reversal of the surface charge asymmetry in purple membrane due to single amino acid substitutions.

Authors:  K C Hsu; G W Rayfield; R Needleman
Journal:  Biophys J       Date:  1996-05       Impact factor: 4.033

5.  Electric field effects in bacteriorhodopsin.

Authors:  R Shinar; S Druckmann; M Ottolenghi; R Korenstein
Journal:  Biophys J       Date:  1977-07       Impact factor: 4.033

Review 6.  Bacteriorhodopsin and the purple membrane of halobacteria.

Authors:  W Stoeckenius; R H Lozier; R A Bogomolni
Journal:  Biochim Biophys Acta       Date:  1979-03-14

7.  Electric, optical and hydrodynamic parameters of lac repressor from measurements of the electric dichroism. High permanent dipole moment associated with the protein.

Authors:  D Pörschke
Journal:  Biophys Chem       Date:  1987-11       Impact factor: 2.352

8.  Orientation of the bacteriorhodopsin chromophore probed by polarized Fourier transform infrared difference spectroscopy.

Authors:  T N Earnest; P Roepe; M S Braiman; J Gillespie; K J Rothschild
Journal:  Biochemistry       Date:  1986-12-02       Impact factor: 3.162

9.  Electric-field induced pK-changes in bacteriorhodopsin.

Authors:  K Tsuji; E Neumann
Journal:  FEBS Lett       Date:  1981-06-15       Impact factor: 4.124

10.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

Authors:  R Henderson; J M Baldwin; T A Ceska; F Zemlin; E Beckmann; K H Downing
Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

View more
  2 in total

1.  Using DelPhi capabilities to mimic protein's conformational reorganization with amino acid specific dielectric constants.

Authors:  Lin Wang; Zhe Zhang; Walter Rocchia; Emil Alexov
Journal:  Commun Comput Phys       Date:  2013-01       Impact factor: 3.246

2.  Modulation of aggregation with an electric field; scientific roadmap for a potential non-invasive therapy against tauopathies.

Authors:  Gaurav Pandey; Sudhir Morla; Harshal B Nemade; Sachin Kumar; Vibin Ramakrishnan
Journal:  RSC Adv       Date:  2019-02-06       Impact factor: 4.036

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.