Literature DB >> 8952042

Structure within eukaryotic cytoplasm and its relationship to glycolytic metabolism.

H Knull1, A P Minton.   

Abstract

Taken together, the results reviewed here indicate that both structural proteins and enzymes exist in a relatively mobile, uncomplexed form and in a relatively immobile form, complexed with the matrix. The relative amounts of free and complexed forms of each protein are dependent upon the local concentrations of both small molecules and other macromolecules and hence may vary in time and space throughout the cell. Free and cytomatrix-bound enzymes exchange rapidly, while free and cytomatrix-bound structural proteins exchange more slowly. These two distinct time scales suggest that the slowly exchanging structural proteins form the core of fibrous structural elements--having many stabilizing intermolecular contacts with near neighbours--whereas the more rapidly exchanging enzymes adsorb to the surface of the structural elements and have fewer near neighbour contacts. The hierarchical nature of these associations is depicted schematically in Figure 3. Metabolism is proposed to proceed primarily via transport of small metabolites rather than by transport of enzymes, which may be organized in functional clusters to facilitate, metabolic regulation.

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Year:  1996        PMID: 8952042     DOI: 10.1002/cbf.698

Source DB:  PubMed          Journal:  Cell Biochem Funct        ISSN: 0263-6484            Impact factor:   3.685


  13 in total

1.  Direct observation of the enhancement of noncooperative protein self-assembly by macromolecular crowding: indefinite linear self-association of bacterial cell division protein FtsZ.

Authors:  G Rivas; J A Fernández; A P Minton
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

2.  The hydrogel nature of mammalian cytoplasm contributes to osmosensing and extracellular pH sensing.

Authors:  Johannes Fels; Sergei N Orlov; Ryszard Grygorczyk
Journal:  Biophys J       Date:  2009-05-20       Impact factor: 4.033

3.  A possible role of intracellular isoelectric focusing in the evolution of eukaryotic cells and multicellular organisms.

Authors:  Jaroslav Flegr
Journal:  J Mol Evol       Date:  2009-08-18       Impact factor: 2.395

Review 4.  Salt and osmosensing: role of cytoplasmic hydrogel.

Authors:  Ryszard Grygorczyk; Francis Boudreault; Aleksandra Platonova; Sergei N Orlov
Journal:  Pflugers Arch       Date:  2015-01-08       Impact factor: 3.657

5.  An equilibrium model for the combined effect of macromolecular crowding and surface adsorption on the formation of linear protein fibrils.

Authors:  Travis Hoppe; Allen P Minton
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

6.  Is a constant low-entropy process at the root of glycolytic oscillations?

Authors:  Henrik Seir Thoke; Lars F Olsen; Lars Duelund; R P Stock; Thomas Heimburg; Luis A Bagatolli
Journal:  J Biol Phys       Date:  2018-05-24       Impact factor: 1.365

Review 7.  Toward an understanding of biochemical equilibria within living cells.

Authors:  Germán Rivas; Allen P Minton
Journal:  Biophys Rev       Date:  2017-12-12

8.  Dynamic Crowding Regulates Transcription.

Authors:  Anne R Shim; Rikkert J Nap; Kai Huang; Luay M Almassalha; Hiroaki Matusda; Vadim Backman; Igal Szleifer
Journal:  Biophys J       Date:  2019-11-15       Impact factor: 4.033

9.  Identification of proteins interacting with lactate dehydrogenase in claw muscle of the porcelain crab Petrolisthes cinctipes.

Authors:  Andrea P Cayenne; Beverly Gabert; Jonathon H Stillman
Journal:  Comp Biochem Physiol Part D Genomics Proteomics       Date:  2011-09-16       Impact factor: 2.674

Review 10.  Macromolecular Crowding In Vitro, In Vivo, and In Between.

Authors:  Germán Rivas; Allen P Minton
Journal:  Trends Biochem Sci       Date:  2016-09-23       Impact factor: 13.807

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