Literature DB >> 8947668

Scalable and expressive medical terminologies.

E Mays1, R Weida, R Dionne, M Laker, B White, C Liang, F J Oles.   

Abstract

The K-Rep system, based on description logic, is used to represent and reason with large and expressive controlled medical terminologies. Expressive concept descriptions incorporate semantically precise definitions composed using logical operators, together with important non-semantic information such as synonyms and codes. Examples are drawn from our experience with K-Rep in modeling the InterMed laboratory terminology and also developing a large clinical terminology now in production use at Kaiser-Permanente. System-level scalability of performance is achieved through an object-oriented database system which efficiently maps persistent memory to virtual memory. Equally important is conceptual scalability-the ability to support collaborative development, organization, and visualization of a substantial terminology as it evolves over time. K-Rep addresses this need by logically completing concept definitions and automatically classifying concepts in a taxonomy via subsumption inferences. The K-Rep system includes a general-purpose GUI environment for terminology development and browsing, a custom interface for formulary term maintenance, a C+2 application program interface, and a distributed client-server mode which provides lightweight clients with efficient run-time access to K-Rep by means of a scripting language.

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Year:  1996        PMID: 8947668      PMCID: PMC2233032     

Source DB:  PubMed          Journal:  Proc AMIA Annu Fall Symp        ISSN: 1091-8280


  15 in total

1.  Desiderata for a clinical terminology server.

Authors:  C G Chute; P L Elkin; D D Sherertz; M S Tuttle
Journal:  Proc AMIA Symp       Date:  1999

2.  Evaluation of a type definition for representing nursing activities within a concept-based terminologic system.

Authors:  S Bakken; M S Cashen; A O'Brien
Journal:  Proc AMIA Symp       Date:  1999

3.  Representing nursing activities within a concept-oriented terminological system: evaluation of a type definition.

Authors:  S Bakken; M S Cashen; E A Mendonca; A O'Brien; J Zieniewicz
Journal:  J Am Med Inform Assoc       Date:  2000 Jan-Feb       Impact factor: 4.497

4.  Benefits of an object-oriented database representation for controlled medical terminologies.

Authors:  H Gu; M Halper; J Geller; Y Perl
Journal:  J Am Med Inform Assoc       Date:  1999 Jul-Aug       Impact factor: 4.497

5.  Evaluation of the clinical LOINC (Logical Observation Identifiers, Names, and Codes) semantic structure as a terminology model for standardized assessment measures.

Authors:  S Bakken; J J Cimino; R Haskell; R Kukafka; C Matsumoto; G K Chan; S M Huff
Journal:  J Am Med Inform Assoc       Date:  2000 Nov-Dec       Impact factor: 4.497

6.  Role grouping as an extension to the description logic of Ontylog, motivated by concept modeling in SNOMED.

Authors:  Kent A Spackman; Robert Dionne; Eric Mays; Jason Weis
Journal:  Proc AMIA Symp       Date:  2002

7.  From data to knowledge through concept-oriented terminologies: experience with the Medical Entities Dictionary.

Authors:  J J Cimino
Journal:  J Am Med Inform Assoc       Date:  2000 May-Jun       Impact factor: 4.497

8.  Terminological mapping for high throughput comparative biology of phenotypes.

Authors:  Y A Lussier; J Li
Journal:  Pac Symp Biocomput       Date:  2004

Review 9.  A review of auditing methods applied to the content of controlled biomedical terminologies.

Authors:  Xinxin Zhu; Jung-Wei Fan; David M Baorto; Chunhua Weng; James J Cimino
Journal:  J Biomed Inform       Date:  2009-03-12       Impact factor: 6.317

10.  Part-whole reasoning in medical ontologies revisited--introducing SEP triplets into classification-based description logics.

Authors:  S Schulz; M Romacker; U Hahn
Journal:  Proc AMIA Symp       Date:  1998
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