Literature DB >> 8913695

Structure and dynamics of oligosaccharides: NMR and modeling studies.

T Peters1, B M Pinto.   

Abstract

Recent advances in the conformational analysis of oligosaccharides have focused on protein-bound oligosaccharides, glycopeptides, and glycoproteins, as well as on the conformational dynamics about glycosidic linkages. Significant progress has been made possible by dramatic improvements in NMR techniques and advances in computational chemistry and technology. Transferred nuclear Overhauser effects have been used to infer the conformations of carbohydrate ligands bound to protein receptors such as antibodies, lectins and enzymes. The increased use of combined NMR spectroscopic and computational protocols has resulted in insights into the dynamics of glycan chains.

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Year:  1996        PMID: 8913695     DOI: 10.1016/s0959-440x(96)80039-x

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  9 in total

1.  The how and why of protein-carbohydrate interaction: a primer to the theoretical concept and a guide to application in drug design.

Authors:  H J Gabius
Journal:  Pharm Res       Date:  1998-01       Impact factor: 4.200

Review 2.  Paramagnetic NMR probes for characterization of the dynamic conformations and interactions of oligosaccharides.

Authors:  Koichi Kato; Takumi Yamaguchi
Journal:  Glycoconj J       Date:  2015-06-07       Impact factor: 2.916

Review 3.  Computational carbohydrate chemistry: what theoretical methods can tell us.

Authors:  R J Woods
Journal:  Glycoconj J       Date:  1998-03       Impact factor: 2.916

4.  Solvation properties of N-acetyl-β-glucosamine: molecular dynamics study incorporating electrostatic polarization.

Authors:  Yang Zhong; Brad A Bauer; Sandeep Patel
Journal:  J Comput Chem       Date:  2011-09-07       Impact factor: 3.376

5.  Conformational analysis of a Chlamydia-specific disaccharide alpha-Kdo-(2-->8)-alpha-Kdo-(2-->O)-allyl in aqueous solution and bound to a monoclonal antibody: observation of intermolecular transfer NOEs.

Authors:  T Sokolowski; T Haselhorst; K Scheffler; R Weisemann; P Kosma; H Brade; L Brade; T Peters
Journal:  J Biomol NMR       Date:  1998-07       Impact factor: 2.835

6.  A tool for the prediction of structures of complex sugars.

Authors:  Junchao Xia; Claudio Margulis
Journal:  J Biomol NMR       Date:  2008-10-25       Impact factor: 2.835

7.  Insight into Early-Stage Unfolding of GPI-Anchored Human Prion Protein.

Authors:  Emilia L Wu; Yifei Qi; Soohyung Park; Sairam S Mallajosyula; Alexander D MacKerell; Jeffery B Klauda; Wonpil Im
Journal:  Biophys J       Date:  2015-11-17       Impact factor: 4.033

8.  N-Acetylated amino sugars: the dependence of NMR 3J(HNH2)-couplings on conformation, dynamics and solvent.

Authors:  Mehdi Mobli; Andrew Almond
Journal:  Org Biomol Chem       Date:  2007-05-31       Impact factor: 3.876

9.  Structure of a protective epitope reveals the importance of acetylation of Neisseria meningitidis serogroup A capsular polysaccharide.

Authors:  Pedro Henriques; Lucia Dello Iacono; Ana Gimeno; Alessia Biolchi; Maria Rosaria Romano; Ana Arda; Gonҫalo J L Bernardes; Jesus Jimenez-Barbero; Francesco Berti; Rino Rappuoli; Roberto Adamo
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-06       Impact factor: 11.205

  9 in total

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