Literature DB >> 8913622

Assignment of 1H and 13C hyperfine-shifted resonances for tuna ferricytochrome c.

S F Sukits1, J D Satterlee.   

Abstract

Tuna ferricytochrome c has been used to demonstrate the potential for completely assigning 1H and 13C strongly hyperfine-shifted resonances in metalloprotein paramagnetic centers. This was done by implementation of standard two-dimensional NMR experiments adapted to take advantage of the enhanced relaxation rates of strongly hyperfine-shifted nuclei. The results show that complete proton assignments of the heme and axial ligands can be achieved, and that assignments of several strongly shifted protons from amino acids located close to the heme can also be made. Virtually all proton-bearing heme 13C resonances have been located, and additional 13C resonances from heme vicinity amino acids are also identified. These results represent an improvement over previous proton resonance assignment efforts that were predicated on the knowledge of specific assignments in the diamagnetic protein and relied on magnetization transfer experiments in heterogeneous solutions composed of mixtures of diamagnetic ferrocytochrome c and paramagnetic ferricytochrome c. Even with that more complicated procedure, complete heme proton assignments for ferricytochrome c have never been demonstrated by a single laboratory. The results presented here were achieved using a more generally applicable strategy with a solution of the uniformly oxidized protein, thereby eliminating the requirement of fast electron self-exchange, which is a condition that is frequently not met.

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Year:  1996        PMID: 8913622      PMCID: PMC1233771          DOI: 10.1016/S0006-3495(96)79481-X

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  The Protein Data Bank: a computer-based archival file for macromolecular structures.

Authors:  F C Bernstein; T F Koetzle; G J Williams; E F Meyer; M D Brice; J R Rodgers; O Kennard; T Shimanouchi; M Tasumi
Journal:  J Mol Biol       Date:  1977-05-25       Impact factor: 5.469

2.  Proton hyperfine resonance assignments using the nuclear Overhauser effect for ferric forms of horse and tuna cytochrome c.

Authors:  J D Satterlee; S Moench
Journal:  Biophys J       Date:  1987-07       Impact factor: 4.033

3.  Proton NMR studies of horse ferricytochrome c. Completion of the assignment of the well resolved hyperfine shifted resonances.

Authors:  H Santos; D L Turner
Journal:  FEBS Lett       Date:  1987-12-21       Impact factor: 4.124

4.  Solution structure of mitochondrial cytochrome c. I. 1H nuclear magnetic resonance of ferricytochrome c.

Authors:  G Williams; G R Moore; R Porteous; M N Robinson; N Soffe; R J Williams
Journal:  J Mol Biol       Date:  1985-06-05       Impact factor: 5.469

5.  13C and proton NMR studies of horse cytochrome c. Assignment and temperature dependence of methyl resonances.

Authors:  H Santos; D L Turner
Journal:  FEBS Lett       Date:  1986-01-01       Impact factor: 4.124

6.  Nomenclature of tetrapyrroles. Recommendations 1986 IUPAC-IUB Joint Commission on Biochemical Nomenclature (JCBN).

Authors:  G P Moss
Journal:  Eur J Biochem       Date:  1988-12-15

7.  Conformation change of cytochrome c. II. Ferricytochrome c refinement at 1.8 A and comparison with the ferrocytochrome structure.

Authors:  T Takano; R E Dickerson
Journal:  J Mol Biol       Date:  1981-11-25       Impact factor: 5.469

8.  The solution structures of tuna and horse cytochromes c.

Authors:  G R Moore; R J Williams
Journal:  Eur J Biochem       Date:  1980-02

9.  Complete heme proton hyperfine resonance assignments of the Glycera dibranchiata component IV metcyano monomer hemoglobin.

Authors:  S L Alam; J D Satterlee
Journal:  Biochemistry       Date:  1994-04-05       Impact factor: 3.162

10.  Natural abundance 13C-NMR study of paramagnetic horse heart ferricytochrome c cyanide complex: assignment of hyperfine shifted heme methyl carbon resonances.

Authors:  Y Yamamoto; N Nanai; Y Inoue; R Chûjô
Journal:  Biochem Biophys Res Commun       Date:  1988-02-29       Impact factor: 3.575

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