Literature DB >> 8902807

Chromatin structure mapping in vivo using methyltransferases.

M P Kladde1, R T Simpson.   

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Year:  1996        PMID: 8902807     DOI: 10.1016/s0076-6879(96)74019-3

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


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  11 in total

1.  Accessibility of transcriptionally inactive genes is specifically reduced at homeoprotein-DNA binding sites in Drosophila.

Authors:  A Carr; M D Biggin
Journal:  Nucleic Acids Res       Date:  2000-07-15       Impact factor: 16.971

2.  Chromatin structure mapping in Saccharomyces cerevisiae in vivo with DNase I.

Authors:  X Wang; R T Simpson
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

3.  Gal4p-mediated chromatin remodeling depends on binding site position in nucleosomes but does not require DNA replication.

Authors:  M Xu; R T Simpson; M P Kladde
Journal:  Mol Cell Biol       Date:  1998-03       Impact factor: 4.272

4.  Effects of Sin- versions of histone H4 on yeast chromatin structure and function.

Authors:  M A Wechser; M P Kladde; J A Alfieri; C L Peterson
Journal:  EMBO J       Date:  1997-04-15       Impact factor: 11.598

5.  Analysis of hypermethylation in the RPS element suggests a signal function for short inverted repeats in de novo methylation.

Authors:  Andreas Müller; Mozart Marins; Yasuko Kamisugi; Peter Meyer
Journal:  Plant Mol Biol       Date:  2002-03       Impact factor: 4.076

6.  Role of nucleosomal occupancy in the epigenetic silencing of the MLH1 CpG island.

Authors:  Joy C Lin; Shinwu Jeong; Gangning Liang; Daiya Takai; Merhnaz Fatemi; Yvonne C Tsai; Gerda Egger; Einav Nili Gal-Yam; Peter A Jones
Journal:  Cancer Cell       Date:  2007-11       Impact factor: 31.743

7.  Analysis of individual remodeled nucleosomes reveals decreased histone-DNA contacts created by hSWI/SNF.

Authors:  Karim Bouazoune; Tina B Miranda; Peter A Jones; Robert E Kingston
Journal:  Nucleic Acids Res       Date:  2009-06-30       Impact factor: 16.971

8.  Footprinting of mammalian promoters: use of a CpG DNA methyltransferase revealing nucleosome positions at a single molecule level.

Authors:  Mehrnaz Fatemi; Martha M Pao; Shinwu Jeong; Einav Nili Gal-Yam; Gerda Egger; Daniel J Weisenberger; Peter A Jones
Journal:  Nucleic Acids Res       Date:  2005-11-27       Impact factor: 16.971

9.  Constitutive nucleosome depletion and ordered factor assembly at the GRP78 promoter revealed by single molecule footprinting.

Authors:  Einav Nili Gal-Yam; Shinwu Jeong; Amos Tanay; Gerda Egger; Amy S Lee; Peter A Jones
Journal:  PLoS Genet       Date:  2006-09-22       Impact factor: 5.917

10.  Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions.

Authors:  Stewart MacArthur; Xiao-Yong Li; Jingyi Li; James B Brown; Hou Cheng Chu; Lucy Zeng; Brandi P Grondona; Aaron Hechmer; Lisa Simirenko; Soile V E Keränen; David W Knowles; Mark Stapleton; Peter Bickel; Mark D Biggin; Michael B Eisen
Journal:  Genome Biol       Date:  2009-07-23       Impact factor: 13.583

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