Literature DB >> 8897167

Evaluation of a quality assurance program for quantitation of human immunodeficiency virus type 1 RNA in plasma by the AIDS Clinical Trials Group virology laboratories.

B Yen-Lieberman1, D Brambilla, B Jackson, J Bremer, R Coombs, M Cronin, S Herman, D Katzenstein, S Leung, H J Lin, P Palumbo, S Rasheed, J Todd, M Vahey, P Reichelderfer.   

Abstract

A number of quantitative assays have been developed by using amplification techniques to measure human immunodeficiency virus type 1 RNA in the plasma of infected individuals. The Virology Committee of the AIDS Clinical Trials Group in the Division of AIDS, National Institute of Allergy and Infectious Diseases, has established a quality assurance program (QAP) for quantitative assays of HIV-1 RNA levels in plasma. The primary objective of the QAP was to ascertain that a laboratory could maintain the precision required to have a 90% power to detect a fivefold difference in RNA copy number between two samples in the same batch. To achieve this goal, the QAP required an intra-assay standard deviation of no greater than 0.15 log10 RNA copies per ml. Panels for proficiency testing consisted of coded replicate samples and a common set of standards. To date, 41 laboratories have participated in the program and have used both commercial and in-house assays. We demonstrated that 65% of the laboratories were capable of attaining the necessary level of intra-assay precision. The fitted regressions indicated that the differences among laboratories that used the same kit were generally greater than the differences among population-average regressions for the kits themselves. The use of an external QAP and a common set of standards reduced differences both among laboratories that used the same kit and among laboratories that used different kits. Thus, use of a common set of standards across clinical trial protocols would allow for cross-protocol comparisons.

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Year:  1996        PMID: 8897167      PMCID: PMC229388          DOI: 10.1128/jcm.34.11.2695-2701.1996

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  32 in total

1.  Multicentre quality control of polymerase chain reaction for detection of HIV DNA.

Authors:  C Defer; H Agut; A Garbarg-Chenon; M Moncany; F Morinet; D Vignon; M Mariotti; J J Lefrère
Journal:  AIDS       Date:  1992-07       Impact factor: 4.177

2.  Reduction in plasma human immunodeficiency virus ribonucleic acid after dideoxynucleoside therapy as determined by the polymerase chain reaction.

Authors:  M Holodniy; D A Katzenstein; D M Israelski; T C Merigan
Journal:  J Clin Invest       Date:  1991-11       Impact factor: 14.808

3.  Families of lines: random effects in linear regression analysis.

Authors:  H A Feldman
Journal:  J Appl Physiol (1985)       Date:  1988-04

4.  Application of a commercial kit for detection of PCR products to quantification of human immunodeficiency virus type 1 RNA and proviral DNA.

Authors:  H J Lin; M Haywood; F B Hollinger
Journal:  J Clin Microbiol       Date:  1996-02       Impact factor: 5.948

5.  Detection and quantification of human immunodeficiency virus RNA in patient serum by use of the polymerase chain reaction.

Authors:  M Holodniy; D A Katzenstein; S Sengupta; A M Wang; C Casipit; D H Schwartz; M Konrad; E Groves; T C Merigan
Journal:  J Infect Dis       Date:  1991-04       Impact factor: 5.226

6.  Standardization of sensitive human immunodeficiency virus coculture procedures and establishment of a multicenter quality assurance program for the AIDS Clinical Trials Group. The NIH/NIAID/DAIDS/ACTG Virology Laboratories.

Authors:  F B Hollinger; J W Bremer; L E Myers; J W Gold; L McQuay
Journal:  J Clin Microbiol       Date:  1992-07       Impact factor: 5.948

7.  A sensitive viral capture assay for detection of plasma viremia in HIV-infected individuals.

Authors:  D R Henrard; W F Mehaffey; J P Allain
Journal:  AIDS Res Hum Retroviruses       Date:  1992-01       Impact factor: 2.205

8.  Direct measurement of viraemia in patients infected with HIV-1 and its relationship to disease progression and zidovudine therapy.

Authors:  M Semple; C Loveday; I Weller; R Tedder
Journal:  J Med Virol       Date:  1991-09       Impact factor: 2.327

9.  Poor sensitivity, specificity, and reproducibility of detection of HIV-1 DNA in serum by polymerase chain reaction. The Transfusion Safety Study Group.

Authors:  M P Busch; D R Henrard; I K Hewlett; W F Mehaffey; J S Epstein; J P Allain; T H Lee; J W Mosley
Journal:  J Acquir Immune Defic Syndr (1988)       Date:  1992

10.  A multicenter proficiency trial of gene amplification (PCR) for the detection of HIV-1.

Authors:  H W Sheppard; M S Ascher; M P Busch; P R Sohmer; M Stanley; M C Luce; J A Chimera; R Madej; G C Rodgers; C Lynch
Journal:  J Acquir Immune Defic Syndr (1988)       Date:  1991
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  66 in total

1.  Comparison of quantitative and qualitative PCR assays for cytomegalovirus DNA in plasma.

Authors:  A M Caliendo; R Schuurman; B Yen-Lieberman; S A Spector; J Andersen; R Manjiry; C Crumpacker; N S Lurain; A Erice
Journal:  J Clin Microbiol       Date:  2001-04       Impact factor: 5.948

2.  Effect of errors in the sequence of optical densities from the Roche AMPLICOR HIV-1 MONITOR assay on the validity of assay results.

Authors:  D J Brambilla; S Granger; C Jennings; J W Bremer
Journal:  J Clin Microbiol       Date:  2001-03       Impact factor: 5.948

3.  Multisite comparison of reproducibility and recovery from the standard and ultrasensitive Roche AMPLICOR HIV-1 MONITOR assays.

Authors:  D J Brambilla; S Granger; C Jennings; J W Bremer
Journal:  J Clin Microbiol       Date:  2001-03       Impact factor: 5.948

4.  Multicenter proficiency testing of nucleic acid amplification methods for the detection of enteroviruses.

Authors:  K E Van Vliet; P Muir; J M Echevarria; P E Klapper; G M Cleator; A M Van Loon
Journal:  J Clin Microbiol       Date:  2001-09       Impact factor: 5.948

5.  Ratio of two successive optical densities from the Roche HIV-1 monitor test as a measure of accuracy of estimates of human immunodeficiency virus RNA concentration.

Authors:  Cheryl Jennings; Donald J Brambilla; James W Bremer
Journal:  J Clin Microbiol       Date:  2002-03       Impact factor: 5.948

6.  Multicenter evaluation of methods to quantitate human immunodeficiency virus type 1 RNA in seminal plasma.

Authors:  S A Fiscus; D Brambilla; R W Coombs; B Yen-Lieberman; J Bremer; A Kovacs; S Rasheed; M Vahey; T Schutzbank; P S Reichelderfer
Journal:  J Clin Microbiol       Date:  2000-06       Impact factor: 5.948

7.  Assessment of agreement between the AMPLICOR HIV-1 MONITOR test versions 1.0 and 1.5.

Authors:  Charles E Hill; Alicia M Green; Jessica Ingersoll; Kirk A Easley; Frederick S Nolte; Angela M Caliendo
Journal:  J Clin Microbiol       Date:  2004-01       Impact factor: 5.948

8.  Comparison of molecular tests for detection and quantification of cell-associated cytomegalovirus DNA.

Authors:  Angela M Caliendo; Belinda Yen-Lieberman; Jovana Baptista; Janet Andersen; Clyde Crumpacker; Rob Schuurman; Stephen A Spector; James Bremer; Nell S Lurain
Journal:  J Clin Microbiol       Date:  2003-08       Impact factor: 5.948

9.  Stochastic processes defining sensitivity and variability of internally calibrated quantitative NASBA-based viral load assays.

Authors:  Jos J A M Weusten; Pieter A W M Wouters; Martien C A van Zuijlen; Paul A van de Wiel
Journal:  Nucleic Acids Res       Date:  2002-12-15       Impact factor: 16.971

10.  Interpreting quantitative cytomegalovirus DNA testing: understanding the laboratory perspective.

Authors:  Colleen S Kraft; Wendy S Armstrong; Angela M Caliendo
Journal:  Clin Infect Dis       Date:  2012-03-12       Impact factor: 9.079

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