Literature DB >> 8893547

Characterization and mapping of Ds-GUS-T-DNA lines for targeted insertional mutagenesis.

D Smith1, Y Yanai, Y G Liu, S Ishiguro, K Okada, D Shibata, R F Whittier, N V Fedoroff.   

Abstract

The transposition patterns of the Ds-GUS transposon T-DNA in 23 independent single-copy lines have been characterized and the map positions of 10 of them on three of the five Arabidopsis chromosomes are reported. Using overexpressed Activator (Ac) elements as a transposase source, it was found that the primary determinant of transposition frequency is the insertion site of the Ac-T-DNA. Neither the structure of the transposon T-DNA nor, in most cases, its insertion site have a significant effect on transposition frequency. Both the frequency and timing of transposition are influenced by the parent through which the transposon and transposase T-DNAs are transmitted. Overall, nearly 75% of plants in which excision has occurred bear a reinserted element and very short-range transpositions predominate, underlining the advantage of using mapped transposons for insertional mutagenesis.

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Year:  1996        PMID: 8893547     DOI: 10.1046/j.1365-313x.1996.10040721.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  28 in total

1.  Analysis of flanking sequences from dissociation insertion lines: a database for reverse genetics in Arabidopsis.

Authors:  S Parinov; M Sevugan; D Ye; W C Yang; M Kumaran; V Sundaresan
Journal:  Plant Cell       Date:  1999-12       Impact factor: 11.277

2.  Genetic ablation of root cap cells in Arabidopsis.

Authors:  R Tsugeki; N V Fedoroff
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

Review 3.  Gene traps: tools for plant development and genomics.

Authors:  P S Springer
Journal:  Plant Cell       Date:  2000-07       Impact factor: 11.277

4.  Screening insertion libraries for mutations in many genes simultaneously using DNA microarrays.

Authors:  R Mahalingam; N Fedoroff
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

5.  Resources for targeted insertional and deletional mutagenesis in Arabidopsis.

Authors:  Sen Zhang; Surabhi Raina; Hong Li; Jun Li; Ewa Dec; Hong Ma; Hai Huang; Nina V Fedoroff
Journal:  Plant Mol Biol       Date:  2003-09       Impact factor: 4.076

6.  A new resource of locally transposed Dissociation elements for screening gene-knockout lines in silico on the Arabidopsis genome.

Authors:  Takuya Ito; Reiko Motohashi; Takashi Kuromori; Saho Mizukado; Tetsuya Sakurai; Hiroko Kanahara; Motoaki Seki; Kazuo Shinozaki
Journal:  Plant Physiol       Date:  2002-08       Impact factor: 8.340

7.  Establishment of an enhancer trap system with Ds and GUS for functional genomics in rice.

Authors:  Y Ito; M Eiguchi; N Kurata
Journal:  Mol Genet Genomics       Date:  2004-06-18       Impact factor: 3.291

8.  Molecular analysis of high-copy insertion sites in maize.

Authors:  A Mark Settles; Susan Latshaw; Donald R McCarty
Journal:  Nucleic Acids Res       Date:  2004-04-01       Impact factor: 16.971

9.  Intrachromosomal excision of a hybrid Ds element induces large genomic deletions in Arabidopsis.

Authors:  Damian R Page; Claudia Köhler; José A Da Costa-Nunes; Célia Baroux; James M Moore; Ueli Grossniklaus
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-23       Impact factor: 11.205

10.  Intrinsic characteristics of neighboring DNA modulate transposable element activity in Drosophila melanogaster.

Authors:  Caroline Esnault; Azhahianambi Palavesam; Kristina Pilitt; David A O'Brochta
Journal:  Genetics       Date:  2010-10-13       Impact factor: 4.562

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