Literature DB >> 8891218

Fluorometric assay for DNA polymerases and reverse transcriptase.

M Seville1, A B West, M G Cull, C S McHenry.   

Abstract

We report a quick, easy and inexpensive fluorometric assay that measures the activity of replication enzymes using Pico-GreenTM. The systems tested include replication of the natural template M13 Gori by E. coli DNA polymerase III holoenzyme and the replication of a synthetic homopolymer by human immunodeficiency virus reverse transcriptase. A direct comparison of the fluorometric assay with the conventional isotopic assay shows that the fluorometric assay accurately reflects the extent of replication. By performing the assay reactions directly in 96-well plates and using a fluorescence plate reader to determine the extent of reaction, the time required to measure replication activities is significantly shortened.

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Year:  1996        PMID: 8891218     DOI: 10.2144/96214st04

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  12 in total

1.  Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp.

Authors:  Roxana E Georgescu; Olga Yurieva; Seung-Sup Kim; John Kuriyan; Xiang-Peng Kong; Mike O'Donnell
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-04       Impact factor: 11.205

2.  New DNA polymerase from the hyperthermophilic marine archaeon Thermococcus thioreducens.

Authors:  Damien Marsic; Jean-Michel Flaman; Joseph D Ng
Journal:  Extremophiles       Date:  2008-08-01       Impact factor: 2.395

3.  Parallel multiplicative target screening against divergent bacterial replicases: identification of specific inhibitors with broad spectrum potential.

Authors:  H Garry Dallmann; Oliver J Fackelmayer; Guy Tomer; Joe Chen; Anna Wiktor-Becker; Tracey Ferrara; Casey Pope; Marcos T Oliveira; Peter M J Burgers; Laurie S Kaguni; Charles S McHenry
Journal:  Biochemistry       Date:  2010-03-23       Impact factor: 3.162

4.  Cellular fura-2 manganese extraction assay (CFMEA).

Authors:  Gunnar F Kwakye; Daphne Li; Olympia A Kabobel; Aaron B Bowman
Journal:  Curr Protoc Toxicol       Date:  2011-05

Review 5.  Base excision repair: contribution to tumorigenesis and target in anticancer treatment paradigms.

Authors:  J L Illuzzi; D M Wilson
Journal:  Curr Med Chem       Date:  2012       Impact factor: 4.530

6.  FRET-based assay to screen inhibitors of HIV-1 reverse transcriptase and nucleocapsid protein.

Authors:  Kamal K Sharma; Frédéric Przybilla; Tobias Restle; Julien Godet; Yves Mély
Journal:  Nucleic Acids Res       Date:  2016-01-13       Impact factor: 16.971

7.  Characterization of a novel DNA polymerase activity assay enabling sensitive, quantitative and universal detection of viable microbes.

Authors:  Daniel R Zweitzig; Nichol M Riccardello; Bruce I Sodowich; S Mark O'Hara
Journal:  Nucleic Acids Res       Date:  2012-04-11       Impact factor: 16.971

8.  A real-time fluorescence method for enzymatic characterization of specialized human DNA polymerases.

Authors:  Dorjbal Dorjsuren; David M Wilson; William A Beard; John P McDonald; Christopher P Austin; Roger Woodgate; Samuel H Wilson; Anton Simeonov
Journal:  Nucleic Acids Res       Date:  2009-08-14       Impact factor: 16.971

9.  A structural role for the PHP domain in E. coli DNA polymerase III.

Authors:  Tiago Barros; Joel Guenther; Brian Kelch; Jordan Anaya; Arjun Prabhakar; Mike O'Donnell; John Kuriyan; Meindert H Lamers
Journal:  BMC Struct Biol       Date:  2013-05-14

10.  A quantitative fluorescence-based steady-state assay of DNA polymerase.

Authors:  Max D Driscoll; Julius Rentergent; Sam Hay
Journal:  FEBS J       Date:  2014-04       Impact factor: 5.542

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