Literature DB >> 8880929

Refined structures of bobwhite quail lysozyme uncomplexed and complexed with the HyHEL-5 Fab fragment.

S Chacko1, E W Silverton, S J Smith-Gill, D R Davies, K A Shick, K A Xavier, R C Willson, P D Jeffrey, C Y Chang, L C Sieker, S Sheriff.   

Abstract

The HyHEL-5 antibody has more than a thousandfold lower affinity for bobwhite quail lysozyme (BWQL) than for hen egg-white lysozyme (HEL). Four sequence differences exist between BWQL and HEL, of which only one is involved in the interface with the Fab. The structure of bobwhite quail lysozyme has been determined in the uncomplexed state in two different crystal forms and in the complexed state with HyHEL-5, an antihen egg-white lysozyme Fab. Similar backbone conformations are observed in the three molecules of the two crystal forms of uncomplexed BWQL, although they show considerable variability in side-chain conformation. A relatively mobile segment in uncomplexed BWQL is observed to be part of the HyHEL-5 epitope. No major backbone conformational differences are observed in the lysozyme upon complex formation, but side-chain conformational differences are seen in surface residues that are involved in the interface with the antibody. The hydrogen bonding in the interface between BWQL and HyHEL-5 is similar to that in previously determined lysozyme-HyHEL-5 complexes.

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Year:  1996        PMID: 8880929     DOI: 10.1002/(SICI)1097-0134(199609)26:1<55::AID-PROT5>3.0.CO;2-F

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  3 in total

1.  Effects of molecular crowding by saccharides on alpha-chymotrypsin dimerization.

Authors:  Chetan N Patel; Schroeder M Noble; Gresham T Weatherly; Ashutosh Tripathy; Donald J Winzor; Gary J Pielak
Journal:  Protein Sci       Date:  2002-05       Impact factor: 6.725

2.  Involvement of water molecules in the association of monoclonal antibody HyHEL-5 with bobwhite quail lysozyme.

Authors:  K A Xavier; K A Shick; S J Smith-Gil; R C Willson
Journal:  Biophys J       Date:  1997-10       Impact factor: 4.033

3.  Epitome: database of structure-inferred antigenic epitopes.

Authors:  Avner Schlessinger; Yanay Ofran; Guy Yachdav; Burkhard Rost
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

  3 in total

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