Literature DB >> 8877699

Wavelets and molecular structure.

M Carson1.   

Abstract

The wavelet method offers possibilities for display, editing, and topological comparison of proteins at a user-specified level of detail. Wavelets are a mathematical tool that first found application in signal processing. The multiresolution analysis of a signal via wavelets provides a hierarchical series of "best' lower-resolution approximations. B-spline ribbons model the protein fold, with one control point per residue. Wavelet analysis sets limits on the information required to define the winding of the backbone through space, suggesting a recognizable fold is generated from a number of points equal to 1/4 or less the number of residues. Wavelets applied to surfaces and volumes show promise in structure-based drug design.

Mesh:

Year:  1996        PMID: 8877699     DOI: 10.1007/bf00124497

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  28 in total

1.  Structures of human and porcine aldehyde reductase: an enzyme implicated in diabetic complications.

Authors:  O El-Kabbani; N C Green; G Lin; M Carson; S V Narayana; K M Moore; T G Flynn; L J DeLucas
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-11-01

2.  A new tool for the qualitative and quantitative analysis of protein surfaces using B-spline and density of surface neighborhood.

Authors:  N Colloc'h; J P Mornon
Journal:  J Mol Graph       Date:  1990-09

3.  Definition of general topological equivalence in protein structures. A procedure involving comparison of properties and relationships through simulated annealing and dynamic programming.

Authors:  A Sali; T L Blundell
Journal:  J Mol Biol       Date:  1990-03-20       Impact factor: 5.469

4.  Macromolecular shape and surface maps by solvent exclusion.

Authors:  J Greer; B L Bush
Journal:  Proc Natl Acad Sci U S A       Date:  1978-01       Impact factor: 11.205

5.  Structure of human factor D. A complement system protein at 2.0 A resolution.

Authors:  S V Narayana; M Carson; O el-Kabbani; J M Kilpatrick; D Moore; X Chen; C E Bugg; J E Volanakis; L J DeLucas
Journal:  J Mol Biol       Date:  1994-01-14       Impact factor: 5.469

6.  Texture mapping parametric molecular surfaces.

Authors:  B S Duncan; A J Olson
Journal:  J Mol Graph       Date:  1995-08

7.  Solvent-accessible surfaces of proteins and nucleic acids.

Authors:  M L Connolly
Journal:  Science       Date:  1983-08-19       Impact factor: 47.728

8.  Three-dimensional structure of recombinant human interferon-gamma.

Authors:  S E Ealick; W J Cook; S Vijay-Kumar; M Carson; T L Nagabhushan; P P Trotta; C E Bugg
Journal:  Science       Date:  1991-05-03       Impact factor: 47.728

9.  Three-dimensional structure of influenza A N9 neuraminidase and its complex with the inhibitor 2-deoxy 2,3-dehydro-N-acetyl neuraminic acid.

Authors:  P Bossart-Whitaker; M Carson; Y S Babu; C D Smith; W G Laver; G M Air
Journal:  J Mol Biol       Date:  1993-08-20       Impact factor: 5.469

Review 10.  Sculpting proteins interactively: continual energy minimization embedded in a graphical modeling system.

Authors:  M C Surles; J S Richardson; D C Richardson; F P Brooks
Journal:  Protein Sci       Date:  1994-02       Impact factor: 6.725

View more
  3 in total

1.  Crystal structure of the SarS protein from Staphylococcus aureus.

Authors:  Ronggui Li; Adhar C Manna; Shaodong Dai; Ambrose L Cheung; Gongyi Zhang
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

2.  Atomic resolution structures of rieske iron-sulfur protein: role of hydrogen bonds in tuning the redox potential of iron-sulfur clusters.

Authors:  Derrick J Kolling; Joseph S Brunzelle; Sangmoon Lhee; Antony R Crofts; Satish K Nair
Journal:  Structure       Date:  2007-01       Impact factor: 5.006

3.  Wavelet Analysis of Protein Motion.

Authors:  Noah C Benson; Valerie Daggett
Journal:  Int J Wavelets Multiresolut Inf Process       Date:  2012-07       Impact factor: 1.408

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.